Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30889
         (358 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA...   127   5e-30
M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal prot...   112   1e-25
Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger...    29   1.7  
BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p pro...    29   1.7  
AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB...    29   1.7  
AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA...    29   1.7  
Z46892-1|CAA86994.1|  558|Drosophila melanogaster Calpain, witho...    28   4.0  
Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.     28   4.0  
X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.     28   4.0  
X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.     28   4.0  
AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p pro...    28   4.0  
AE013599-2881|AAF57564.1|  565|Drosophila melanogaster CG7563-PA...    28   4.0  
AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB...    28   4.0  

>AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA
           protein.
          Length = 140

 Score =  127 bits (306), Expect = 5e-30
 Identities = 58/58 (100%), Positives = 58/58 (100%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal protein
           L17A protein.
          Length = 140

 Score =  112 bits (270), Expect = 1e-25
 Identities = 52/58 (89%), Positives = 52/58 (89%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV      RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVSVVPSARQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger
           protein protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFEDN 86
           R+R+P R+RDG F Y  DN
Sbjct: 72  RRRRPVRKRDGTFNYSADN 90


>BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p
           protein.
          Length = 608

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFEDN 86
           R+R+P R+RDG F Y  DN
Sbjct: 66  RRRRPVRKRDGTFNYSADN 84


>AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB,
           isoform B protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFEDN 86
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


>AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA,
           isoform A protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFEDN 86
           R+R+P R+RDG F Y  DN
Sbjct: 57  RRRRPVRKRDGTFNYSADN 75


>Z46892-1|CAA86994.1|  558|Drosophila melanogaster Calpain, without
           calmodulin-likedomain protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


>Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


>X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


>X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 466 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 507


>AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p
           protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


>AE013599-2881|AAF57564.1|  565|Drosophila melanogaster CG7563-PA,
           isoform A protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


>AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB,
           isoform B protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 173 RPQISTFFGYRPCDGRALHFALVIDYDTRIVLKVYKYSITPS 48
           RPQ   FF Y+   GR+ HF    +   R  L    Y I PS
Sbjct: 489 RPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPS 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,391,845
Number of Sequences: 53049
Number of extensions: 256287
Number of successful extensions: 599
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)