Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30889
         (358 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   7.6  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    20   7.6  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    20   7.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    20   7.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    20   7.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   7.6  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = +1

Query: 220 ISNCVSLSFPSTQSQTRKIIICVID 294
           ++NC  ++  ++  ++ K++ C ID
Sbjct: 100 VNNCKDITESNSCKKSSKLLQCFID 124


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 261 SNPKNYNLRNRHLQCKCAKLEY 326
           +N   YN  N +    C KL Y
Sbjct: 93  NNNYKYNYNNNNYNNNCKKLYY 114


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 261 SNPKNYNLRNRHLQCKCAKLEY 326
           +N   YN  N +    C KL Y
Sbjct: 93  NNNYKYNYNNNNYNNNCKKLYY 114


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 261 SNPKNYNLRNRHLQCKCAKLEY 326
           +N   YN  N +    C KL Y
Sbjct: 93  NNNYKYNYNNNNYNNNCKKLYY 114


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 261 SNPKNYNLRNRHLQCKCAKLEY 326
           +N   YN  N +    C KL Y
Sbjct: 93  NNNYKYNYNNNNYNNNCKKLYY 114


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 82  SSKYINTPSRLLNGFRCLMTTAGI 11
           + KY N P  L   F     TAG+
Sbjct: 215 NDKYSNVPYFLFGDFNFRTDTAGV 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,562
Number of Sequences: 438
Number of extensions: 1666
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)