Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30880
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    25   0.64 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.6  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   2.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.8  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 514 YPLQVCRKELRSKNSLYSHNSV 579
           Y  + C +  R+KNSL +H S+
Sbjct: 36  YVCEFCNRRYRTKNSLTTHKSL 57


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 113 YYFFIHSSILNK 78
           +YFF+H  +LN+
Sbjct: 257 FYFFLHKQVLNR 268


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 113 YYFFIHSSILNK 78
           +YFF+H  +LN+
Sbjct: 257 FYFFLHKQVLNR 268


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 493 VRSRXNPYPL-QVCRKELRSKNSLYSHNSV 579
           V +R +  P+  +C++   S NSL +H S+
Sbjct: 25  VHTRPSKEPICNICKRVYSSLNSLRNHKSI 54


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 526 VCRKELRSKNSLYSHNSV 579
           +C K  R+ NSL +H S+
Sbjct: 406 LCHKVFRTLNSLNNHKSI 423


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 449 FHGFFLTVLLSHFXQFGRAXI 511
           +H FF+ V+   F  FG A I
Sbjct: 5   YHFFFILVITLIFLYFGEADI 25


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/26 (23%), Positives = 11/26 (42%)
 Frame = +1

Query: 493 VRSRXNPYPLQVCRKELRSKNSLYSH 570
           + ++  PY   VC +       L+ H
Sbjct: 141 IHTKERPYKCDVCERAFEHSGKLHRH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,228
Number of Sequences: 438
Number of extensions: 2735
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)