Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30876
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0189 + 15165485-15168694                                         30   1.5  
03_01_0052 - 450258-450285,450345-450457,450540-450746,451021-45...    29   3.5  

>12_02_0189 + 15165485-15168694
          Length = 1069

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -3

Query: 523  KLNLS*RKITFEVLNMEIKEKNLRWQ 446
            KLNLS RK+  EV+N +  ++N RW+
Sbjct: 924  KLNLSWRKVLKEVMNNKESDENNRWE 949


>03_01_0052 -
           450258-450285,450345-450457,450540-450746,451021-451080,
           451281-451376,451495-451551,451786-451845,452774-452853,
           454265-454367,454530-454571
          Length = 281

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 421 ILYSI*ISFAIANFSLLFPYS 483
           I Y++ + F +ANF+L FPY+
Sbjct: 172 ICYTVGLDFTVANFTLTFPYT 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,797,452
Number of Sequences: 37544
Number of extensions: 285646
Number of successful extensions: 432
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)