Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30870
(317 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 47 4e-06
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 45 1e-05
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 45 1e-05
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 44 2e-05
02_05_1340 + 35797923-35799881 44 2e-05
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 44 2e-05
11_04_0293 + 15926561-15928834 44 3e-05
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 43 6e-05
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 42 1e-04
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 42 1e-04
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 40 3e-04
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 38 0.001
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 36 0.007
03_02_0023 + 5065962-5066079,5066179-5067614 34 0.021
03_02_0024 + 5079690-5081351 33 0.064
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 30 0.34
02_04_0583 + 24078766-24079800,24080585-24081643 29 0.79
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 27 3.2
07_01_0232 + 1701612-1701753,1701848-1703280 26 5.6
07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569 26 5.6
01_06_0196 - 27410837-27413296 26 5.6
10_08_0260 - 16290798-16290893,16292284-16292570,16293248-162939... 25 9.7
08_02_1618 + 28280414-28281193 25 9.7
05_05_0268 + 23720837-23720914,23722398-23722486,23722669-237228... 25 9.7
04_04_0911 - 29340222-29341103 25 9.7
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 25 9.7
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/86 (27%), Positives = 45/86 (52%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
++VYI Y+IG VP+V + E+F ++K + + + + FA+ F +
Sbjct: 397 ILVYIGAYSIGMGPVPWVVMSEIFSIDMKAIGGSLVTLVSWLGSFAISYSFSFLMDWSSA 456
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQK 264
T F F+ S + ++F+VM +P+ K
Sbjct: 457 GTFFM-FSAASLITILFVVMVVPETK 481
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/88 (20%), Positives = 45/88 (51%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
VAL+ +++ ++ G +P++ + E+ P ++K A A + + F + ++ ++
Sbjct: 349 VALVAFVIAFSFGMGAIPWIIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLM-LSW 407
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
F + + S LVF+++ +P+ K
Sbjct: 408 SAGGTFVSYMVVSAFTLVFVILWVPETK 435
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 45.2 bits (102), Expect = 1e-05
Identities = 27/88 (30%), Positives = 40/88 (45%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
VAL YIV Y+ G TVP++ E++P + IA + V+ V F + +A
Sbjct: 456 VALGAYIVSYSPGMGTVPWIVNSEIYPLRFRGVCGGIAAVANWVSNLIVTQTFLSLTKAL 515
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
F F SF LV + +P+ K
Sbjct: 516 GTSATFFLFCAVSFFALVVVFFTVPETK 543
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
VAL+ YI+ ++ G +P+V + E+ P ++K A + + +A+ ++ ++
Sbjct: 378 VALVAYIITFSFGMGAIPWVMMSEILPVSIKSLGGSFATLANMLTSWAITMTANLL-LSW 436
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
F + I S LVF++ +P+ K
Sbjct: 437 SAGGTFLSYMIVSAFTLVFVIFWVPETK 464
>02_05_1340 + 35797923-35799881
Length = 652
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +1
Query: 4 ALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYK 183
+++VY+ C+ +G +P + E+FPT V+ I + +A AV V+ +
Sbjct: 537 SVVVYLCCFVMGFGPIPNILCAEIFPTRVRGLCIAICSLAFWLADIAVTYTLPVMLASLG 596
Query: 184 IXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
+ +F + + LVF+ + +P+ K P
Sbjct: 597 LAGLFAIYAAVCCVALVFVALRVPETKGLP 626
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
+++I+Y C+ +G +P + E+FPT V+ I + + V V+ A
Sbjct: 665 ISVIIYFCCFVMGFGPIPNILCAEIFPTRVRGICIAICALTFWIGDIIVTYSLPVMLNAI 724
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
+ VF + + + VF+ + +P+ K P
Sbjct: 725 GLAGVFGIYAVVCSIAFVFVFLKVPETKGMP 755
>11_04_0293 + 15926561-15928834
Length = 757
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +1
Query: 4 ALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYK 183
++IVY C+ +G +P + E+FPT V+ I + + AV V+ +
Sbjct: 645 SVIVYFCCFVMGFGPIPNILCAEIFPTRVRGLCIAICSLTFWLGDIAVTYSLPVMLSSVG 704
Query: 184 IXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
+ VF + + LVF+ + +P+ K P
Sbjct: 705 LAGVFSFYAAVCCVALVFVALKVPETKGLP 734
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 42.7 bits (96), Expect = 6e-05
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
L VYI Y+IG VP+V + E+FP N+K + +AV F ++
Sbjct: 303 LKVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFF-MSWSS 361
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQK 264
F F + + ++F+V +P+ K
Sbjct: 362 SGTFFLFALVCAVAILFIVKIVPETK 387
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
+AL++Y+ CY + + ++ I E+FP ++ IA + + V F +E
Sbjct: 399 IALLLYVGCYQLSFGPIGWLMISEVFPLRLRGRGLSIAVLVNFASNALVTFAFSPLEDLI 458
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
+F F + + LVF+ +P+ K
Sbjct: 459 GTGILFSAFGVIAVASLVFIFFIVPETK 486
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
V++I+Y + +G +P + E+FPT V+ I + + V V+ A
Sbjct: 632 VSVILYFCFFVMGFGPIPNILCAEIFPTTVRGICIAICALTFWIGDIIVTYTLPVMLNAI 691
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
+ VF + + L +F+ M +P+ K P
Sbjct: 692 GLAGVFGIYAVVCILAFLFVFMKVPETKGMP 722
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/89 (20%), Positives = 41/89 (46%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
+I+Y+ C+ +G +P V E+FP + + I + + V F V+ + +
Sbjct: 604 VIIYVCCFVMGFGPIPNVLCSELFPPSCRNRCMSICTLTFWIVSIIVTYAFPVMLSSIGL 663
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
V + + + +F+++ +P+ K P
Sbjct: 664 IGVCGIYAVVCIVSFIFVLIKVPETKGMP 692
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/100 (22%), Positives = 49/100 (49%)
Frame = +1
Query: 10 IVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIX 189
++Y++ +A+G VP + + E+F + ++ A ++ V+ F + F V + I
Sbjct: 409 VLYVLSFALGAGPVPALLLPEIFASRIRAKAVALSLGMHWVSNFFIGLYFLSVVNKFGIS 468
Query: 190 TVFXGFTIFSFLGLVFMVMXLPKQKESPSPQSKRNCATKS 309
TV+ GF L +V++ + + K + +R ++ S
Sbjct: 469 TVYLGFASVCALAVVYIAGNVVETKGRSLEEIERALSSAS 508
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
L +YI ++ G TVP++ E++P + A V+ AV F + A
Sbjct: 469 LALYIAAFSPGMGTVPWIVNSEVYPLRHRGVCGGAAATANWVSNLAVAQSFLSLTDAIGA 528
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
F F S L F+++ +P+ K P
Sbjct: 529 AWTFLIFGGLSVAALAFVLVCVPETKGLP 557
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 34.3 bits (75), Expect = 0.021
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +1
Query: 4 ALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYK 183
A++ ++ +A G V +V E++P ++ A+ I + A F + A
Sbjct: 393 AMLSFVASFASGLGPVAWVYTSEIYPVRLRAQAAAIGTGLNRLMSGATTMSFLSLSNAIT 452
Query: 184 IXTVFXGFTIFSFLGLVFMVMXLPKQK 264
I F + + G VFM LP+ K
Sbjct: 453 IAGSFYLYASIAAAGWVFMYFFLPETK 479
>03_02_0024 + 5079690-5081351
Length = 553
Score = 32.7 bits (71), Expect = 0.064
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
++V++ ++IG + +V E+FP ++ + V AV F + +A
Sbjct: 428 VLVFVASFSIGMGPIAWVYSSEIFPLRLRAQGCALGTAMNRVVSGAVSMSFISLYKAITF 487
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPK 258
F + + G VFM LP+
Sbjct: 488 AGSFYLYAGIAAAGWVFMFFFLPE 511
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 30.3 bits (65), Expect = 0.34
Identities = 19/91 (20%), Positives = 34/91 (37%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
++L + Y IG +P + EMFPT + + + F V+
Sbjct: 590 LSLTICFCSYVIGLGPIPNILCSEMFPTRARATCASFCSLAFWFGRLLSIYCFPVMLSTI 649
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
+ + L LVF+ + +P+ K P
Sbjct: 650 GLSGACAIYAFVCCLVLVFVYLRVPETKGLP 680
>02_04_0583 + 24078766-24079800,24080585-24081643
Length = 697
Score = 29.1 bits (62), Expect = 0.79
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 67 GEMFPTNVKLYASCI-AHIYTGVAMFAVQNLFRVVEQAYK 183
GE FP ++KL+ S I AH+ +G A +NL R +E++ K
Sbjct: 423 GEGFPPDMKLFTSMIRAHLKSGEPKQA-ENLLREMERSIK 461
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/95 (22%), Positives = 37/95 (38%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
+ VY+ +A + ++ E+FP V+ I + AV LF +
Sbjct: 423 IAVYVAGFAWSWGPLGWLVPSEVFPLEVRSAGQSITVAVNFLMTTAVAQLFLATLCRMRA 482
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQKESPSPQSKR 291
+F F + F+ + LP+ K P Q +R
Sbjct: 483 G-IFFFFAAWLVAMTAFVYLLLPETKGLPIEQVRR 516
>07_01_0232 + 1701612-1701753,1701848-1703280
Length = 524
Score = 26.2 bits (55), Expect = 5.6
Identities = 22/94 (23%), Positives = 37/94 (39%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
V + VY+ +A + ++ E+FP V+ IA + AV F +
Sbjct: 397 VLVAVYVAGFAWSWGPLGWLVPSEIFPLEVRSAGQSIAVAVNFLLTTAVAQSFLAMLCHM 456
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQKESPSPQ 282
K +F F + F+ + LP+ K P Q
Sbjct: 457 KAG-IFFFFAAWLVAMTAFVYLLLPETKGLPIEQ 489
>07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569
Length = 429
Score = 26.2 bits (55), Expect = 5.6
Identities = 22/94 (23%), Positives = 37/94 (39%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
V + VY+ +A + ++ E+FP V+ IA + AV F +
Sbjct: 303 VLVAVYVAGFAWSWGPLGWLVPSEIFPLEVRSAGQSIAVAVNFLLTTAVAQSFLAMLCHM 362
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPKQKESPSPQ 282
K +F F + F+ + LP+ K P Q
Sbjct: 363 KAG-IFFFFAAWLVAMTAFVYLLLPETKGLPIEQ 395
>01_06_0196 - 27410837-27413296
Length = 819
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 172 QAYKIXTVFXGFTIFSFLGLVFMVMXLPKQKESPSPQSKR 291
+ Y T+F GFT +F G +++ + L SP ++R
Sbjct: 395 KCYPKGTLFNGFTSANFPGSIYLKVPLDFNASSPRVSAQR 434
>10_08_0260 -
16290798-16290893,16292284-16292570,16293248-16293901,
16294999-16295546,16295900-16295961,16296062-16296481
Length = 688
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 2 WPLSF-TSCATPSAYQPCRMLQ 64
W L+F TSC TPS + C +++
Sbjct: 514 WALNFPTSCLTPSHRRKCALIE 535
>08_02_1618 + 28280414-28281193
Length = 259
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = -1
Query: 284 DXGEGLSFCFGSXITMKTSPRNEKIVNPXNTVXILYACSTTR--KRFCTANIATPV*MCA 111
D GEG + G T++ PR+ P + + A +T +A P +CA
Sbjct: 56 DDGEGCADGSGGGPTVRRRPRSSPASTPCSNPDAVLALLSTGLCADLAAVVVAEPRVLCA 115
Query: 110 MQDAYS 93
DA S
Sbjct: 116 KDDAIS 121
>05_05_0268 +
23720837-23720914,23722398-23722486,23722669-23722807,
23722899-23722973,23723069-23723190,23723287-23723362,
23723786-23723845,23723939-23724091
Length = 263
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 13 VYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIXT 192
VYI+ I +T P+V + + ++ ++Y GVA+FA + RV+ Y
Sbjct: 149 VYILMVLITEATTPFVNL--RWYLDLAGRKDSKLYLYNGVALFAGWLVARVILFVYFFAH 206
Query: 193 VFXGF 207
V+ F
Sbjct: 207 VYLHF 211
>04_04_0911 - 29340222-29341103
Length = 293
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 305 FVAQLRLDXGEGLSFCFGS 249
FV + RLD G+ +SFC G+
Sbjct: 158 FVKEKRLDAGDTVSFCRGA 176
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/86 (18%), Positives = 33/86 (38%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
L +YI ++ G VP+ E++P + ++ V+ V F +
Sbjct: 378 LALYIAFFSPGMGPVPWAVNSEIYPEAYRGMCGGMSATVNWVSNLIVAQTFLSIVGLVGT 437
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQK 264
F + L +F+ + +P+ K
Sbjct: 438 GLTFLIIAGIAVLAFIFVALYVPETK 463
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,348,327
Number of Sequences: 37544
Number of extensions: 146036
Number of successful extensions: 353
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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