Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30870
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 33 0.034
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 33 0.045
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 31 0.24
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 31 0.24
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 31 0.24
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 30 0.41
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 30 0.41
U88165-6|AAK21396.2| 214|Caenorhabditis elegans Hypothetical pr... 28 1.7
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 1.7
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 27 3.9
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 27 3.9
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 27 3.9
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 26 6.8
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 26 6.8
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 25 8.9
U20861-4|AAA62296.3| 297|Caenorhabditis elegans Hypothetical pr... 25 8.9
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 25 8.9
AC090999-20|AAP46262.1| 132|Caenorhabditis elegans Hypothetical... 25 8.9
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 25 8.9
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 33.5 bits (73), Expect = 0.034
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKI 186
++ ++V +A G +P+ E+F + + A+ ++ VA + V F +
Sbjct: 412 ILSFVVTFAFGPGPIPWFFTSELFDSATRGRAAAVSATSNWVANWMVGLTFLPINNIIH- 470
Query: 187 XTVFXGFTIFSFLGLVFMVMXLPKQK-ESPS 276
F FT F+F +F +P+ K +SPS
Sbjct: 471 QYAFLMFTFFTFTFAIFTWKFVPETKGKSPS 501
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.045
Identities = 19/90 (21%), Positives = 40/90 (44%)
Frame = +1
Query: 4 ALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYK 183
+L+ Y+ Y +G S +P++ E+F + A ++ F V + +Q
Sbjct: 427 SLVFYMCVYGVG-SPIPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLPFQQLVG 485
Query: 184 IXTVFXGFTIFSFLGLVFMVMXLPKQKESP 273
I + F I + +F+ + LP+ ++ P
Sbjct: 486 ITFSYFPFIIGLAVFGIFIYVLLPETRDRP 515
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 30.7 bits (66), Expect = 0.24
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAH----IYTGVAMFAVQNLFRVV 168
VALI+Y Y G + + E+ P + A +A+ + ++ F V L+ V+
Sbjct: 371 VALIIYGYTYGTGVGPISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVI 430
Query: 169 EQAYKIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
+Y + ++I SF+ ++ + LP+ K
Sbjct: 431 -GSYAFLIL---YSIPSFISMLILFRYLPETK 458
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 30.7 bits (66), Expect = 0.24
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAH----IYTGVAMFAVQNLFRVV 168
VALI+Y Y G + + E+ P + A +A+ + ++ F V L+ V+
Sbjct: 371 VALIIYGYTYGTGVGPISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVI 430
Query: 169 EQAYKIXTVFXGFTIFSFLGLVFMVMXLPKQK 264
+Y + ++I SF+ ++ + LP+ K
Sbjct: 431 -GSYAFLIL---YSIPSFISMLILFRYLPETK 458
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/86 (18%), Positives = 39/86 (45%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAY 180
V + VY++ ++ G +++P+V E +P + I+ + V + + + A
Sbjct: 477 VMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSISTLSNWVFNLIIALTYLSLTHAI 536
Query: 181 KIXTVFXGFTIFSFLGLVFMVMXLPK 258
F + IF+ + +F+ +P+
Sbjct: 537 TKYGAFWLYAIFTIIAFIFIYFLVPE 562
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 30.7 bits (66), Expect = 0.24
Identities = 18/87 (20%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIA------HIYTGVAMFAVQNLFR 162
+A VY++ ++ G +++P+V E +P + ++C+A ++ + +L +
Sbjct: 469 IACGVYLLTFSSGFTSLPWVLNSEFYPMWAR--STCVAISTTSNWVFNLIIALTYLSLTQ 526
Query: 163 VVEQAYKIXTVFXGFTIFSFLGLVFMV 243
V+ + Y ++ G T+ +F+ ++F+V
Sbjct: 527 VIGK-YGAFWLYAGLTVIAFIFILFLV 552
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 29.9 bits (64), Expect = 0.41
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCI-------AHIYTGVAMFAVQNLFRV 165
++++++ +A G +P+ + E+F ++ + A+ I A++ G+ + NL +
Sbjct: 411 VLLFVISFATGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGLTFLPINNLMQ- 469
Query: 166 VEQAYKIXTVFXGFTIF 216
+ ++ I + F F IF
Sbjct: 470 -QYSFFIFSGFLAFFIF 485
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.41
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +1
Query: 7 LIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCI-------AHIYTGVAMFAVQNLFRV 165
++++++ +A G +P+ + E+F ++ + A+ I A++ G+ + NL +
Sbjct: 393 VLLFVISFATGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGLTFLPINNLMQ- 451
Query: 166 VEQAYKIXTVFXGFTIF 216
+ ++ I + F F IF
Sbjct: 452 -QYSFFIFSGFLAFFIF 467
>U88165-6|AAK21396.2| 214|Caenorhabditis elegans Hypothetical
protein F54C1.8 protein.
Length = 214
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 106 CIAHIYTGVAMFAVQNLFRVVEQAYKIXTVFXGFTI----FSFLGLVFMVMXLP 255
C A + + A +F+ V Y + TVF G TI +F+ ++++ LP
Sbjct: 85 CFAAVDIFAGLLAFVLIFKSVRIIYIVLTVFSGITIGLESLTFMDTIYLLQRLP 138
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 13 VYIVCYAIGXSTVPYVTIGEMFPTNVKLY 99
+Y+V +AIG + PY + ++FP ++ LY
Sbjct: 7604 IYLV-HAIGGTIYPYYSFLQIFPKDISLY 7631
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 165
+ LIV YA +P E +Y++CI + G FA Q+ FR+
Sbjct: 778 ILLIVACTVYAFKTRKIPE-NFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRI 831
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 165
+ LIV YA +P E +Y++CI + G FA Q+ FR+
Sbjct: 778 ILLIVACTVYAFKTRKIPE-NFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRI 831
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 1 VALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 165
+ LIV YA +P E +Y++CI + G FA Q+ FR+
Sbjct: 778 ILLIVACTVYAFKTRKIPE-NFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRI 831
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 177 RLFDNPEEILHCKHSDACINVCYAGRVQLDISREHLP 67
R F + I +C+HSDA I+ + +I ++HLP
Sbjct: 520 RKFGPGKSISNCRHSDA-IDFAAMSYIWKNIRQQHLP 555
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 177 RLFDNPEEILHCKHSDACINVCYAGRVQLDISREHLP 67
R F + I +C+HSDA I+ + +I ++HLP
Sbjct: 520 RKFGPGKSISNCRHSDA-IDFAAMSYIWKNIRQQHLP 555
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +2
Query: 20 SCAT----PSAYQPCRMLQSGRCSRLMSSCTRP 106
SCA+ PS+++ C+M Q+ C R+ + CT+P
Sbjct: 411 SCASNNDCPSSHE-CKMDQAVCCPRMQTICTQP 442
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +1
Query: 88 VKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIXTVFXGFTIFSFLGLVFMVMXLPKQKE 267
V L + + G + VQN FR+ Q ++ F F I ++++V +P+ ++
Sbjct: 119 VLLTVGSYLYFFEGRSSILVQNKFRITRQKTRVIYYFL-FLIPWMSSILYVVKFIPEDQD 177
Query: 268 S 270
+
Sbjct: 178 A 178
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/83 (18%), Positives = 36/83 (43%)
Frame = +1
Query: 4 ALIVYIVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYK 183
A+ ++ +A+G + GE+ P N + +S + V F + + V+
Sbjct: 396 AICMFNFLFAMGPGPLSMFITGELVPQNCRSASSVWTNAVMAVVRFLILTFYLPVK---N 452
Query: 184 IXTVFXGFTIFSFLGLVFMVMXL 252
+ + F + IF + ++ V+ +
Sbjct: 453 MTSEFMAYAIFFVVPMIVAVLVI 475
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 2 WPLSFTSCATPSAYQPCRMLQSG-RCSRLMSSC 97
W LS C++ + CR++ G +C + SSC
Sbjct: 592 WTLSPAKCSSATRPDECRLITDGTKCVFVDSSC 624
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 2 WPLSFTSCATPSAYQPCRMLQSG-RCSRLMSSC 97
W LS C++ + CR++ G +C + SSC
Sbjct: 592 WTLSPAKCSSATRPDECRLITDGTKCVFVDSSC 624
>U20861-4|AAA62296.3| 297|Caenorhabditis elegans Hypothetical
protein C28H8.8 protein.
Length = 297
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 19 IVCYAIGXSTVPYVTIGEMFPTNVKLYASCIAHIYTG 129
+V IG T+ E PTN + YA+ IYTG
Sbjct: 112 VVTLGIGLDVKAETTLKETLPTNSRFYAA--DPIYTG 146
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 2 WPLSFTSCATPSAYQPCRMLQSG-RCSRLMSSC 97
W LS C++ + CR++ G +C + SSC
Sbjct: 592 WTLSPAKCSSATRPDECRLITDGTKCVFVDSSC 624
>AC090999-20|AAP46262.1| 132|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16b protein.
Length = 132
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +1
Query: 55 YVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNL-FRVVEQAYKIXTVFXGFTIFSFLGL 231
Y E+FPT ++ A V A + + EQ K+ + F + L
Sbjct: 29 YTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQFGKVFMIIP-FGCMAVLAA 87
Query: 232 VFMVMXLPKQKESPSPQS 285
V ++ LP+ P P+S
Sbjct: 88 VMTLLFLPETMGKPLPES 105
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +1
Query: 55 YVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNL-FRVVEQAYKIXTVFXGFTIFSFLGL 231
Y E+FPT ++ A V A + + EQ K+ + F + L
Sbjct: 472 YTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQFGKVFMIIP-FGCMAVLAA 530
Query: 232 VFMVMXLPKQKESPSPQS 285
V ++ LP+ P P+S
Sbjct: 531 VMTLLFLPETMGKPLPES 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,059,323
Number of Sequences: 27780
Number of extensions: 129157
Number of successful extensions: 339
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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