Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30863
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 99 2e-21
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 4.5
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 7.8
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +1
Query: 7 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 186
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 187 HYKGQQVGKVMQVYRKKFVVYIE 255
+KG G+V++ YRKKFV++I+
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHID 82
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 255 RIQREKANGATAYVGIHPSK 314
+I REKANG+T ++GIHPSK
Sbjct: 83 KITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +1
Query: 7 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 186
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 187 HYKGQQVGKVMQVYRKKFVVYIE 255
+KG G+V++ YRKKFV++I+
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHID 82
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 255 RIQREKANGATAYVGIHPSK 314
+I REKANG+T ++GIHPSK
Sbjct: 83 KITREKANGSTVHIGIHPSK 102
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +1
Query: 7 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 186
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 187 HYKGQQVGKVMQVYRKKFVVYIE 255
+KG G+V++ YRKKFV++I+
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHID 82
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +3
Query: 255 RIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 416
+I REKANG+T ++GIHPSK I KLK++KDR+A+++R+A GR G KGK+
Sbjct: 83 KITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 288 LLHHWPFLFESFNVYNKLFTIHLHHFANLLAFVVST 181
LL W LFE NV LF I H LLA +++T
Sbjct: 74 LLAVWESLFEHKNVTADLFIIPFFHSFTLLALLIAT 109
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 4.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -2
Query: 450 KRPPWLWQFPRCIYPCLCQVQPVC 379
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 10 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 189
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 190 YKG 198
YKG
Sbjct: 149 YKG 151
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -2
Query: 207 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 103
NLL A VV ++NL+ ++ A +HG ++E + L+QG
Sbjct: 11 NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,932,069
Number of Sequences: 27780
Number of extensions: 240323
Number of successful extensions: 677
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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