Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30862
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    76   8e-16
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.8  

>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 76.2 bits (179), Expect = 8e-16
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +3

Query: 189 KEASGHTVEFPSLPEPVREHAKVDITPWHSSMHNMGFGFNRSVWHNIMEIQEQFCAYDDY 368
           K AS     +  LP     + KV++TPW SS HNMG  FNR++W+ I+     FC YDDY
Sbjct: 34  KYASQSQWGYQVLPTLYSIYQKVEVTPWISSKHNMGMAFNRTMWYEIVRCARHFCEYDDY 93

Query: 369 NWDYSL 386
           NWD+SL
Sbjct: 94  NWDWSL 99



 Score = 27.1 bits (57), Expect = 0.48
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +1

Query: 127 KRKKQMTLNYIQQVRMANEERRKRQDTQWNFQVYPNLYGNTQKL 258
           ++++Q  L+  Q ++      +    +QW +QV P LY   QK+
Sbjct: 13  QQQQQDQLSQQQSLQTQVTTEKYASQSQWGYQVLPTLYSIYQKV 56


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 106 QYHANGDKRKKQMTLNYIQQVRMANEERRKRQD 204
           +Y  NG K+      N +Q +R   E  R R+D
Sbjct: 110 EYLRNGSKKMTSTWENTVQNIRDKKEAERLRRD 142


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 225 NLEIPLCVLTLPSLLVR 175
           NLE+P C L  P+L+ R
Sbjct: 98  NLELPSCRLPCPNLIPR 114


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 318 WHNIMEIQEQFCAYDD 365
           W N+++ +EQ  A DD
Sbjct: 318 WRNVIDQEEQLAAVDD 333


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 103 YQYHANGDKRKKQMTLNYIQQV 168
           Y Y  NGD+RK  +TLN +  V
Sbjct: 328 YYYEENGDRRK--ITLNDVYYV 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,822
Number of Sequences: 2352
Number of extensions: 13720
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)