Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30858
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 168 1e-41
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 168 1e-41
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 168 1e-41
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 168 1e-41
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 168 1e-41
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 168 1e-41
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 168 1e-41
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 168 1e-41
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 145 9e-35
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 168 bits (408), Expect = 1e-41
Identities = 78/87 (89%), Positives = 83/87 (95%)
Frame = -3
Query: 513 GSMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 334
G MHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVA
Sbjct: 2 GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVA 61
Query: 333 QVRFVTGKKILRIMKAMGLAPDLPEDL 253
QVRFVTG KILRI+K+ GLAPDLPEDL
Sbjct: 62 QVRFVTGNKILRILKSKGLAPDLPEDL 88
Score = 125 bits (302), Expect = 1e-28
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASA 74
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK VLPPNWKYESSTASA
Sbjct: 89 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASA 148
Query: 73 LVA 65
LVA
Sbjct: 149 LVA 151
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 145 bits (352), Expect = 9e-35
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = -3
Query: 483 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 304
SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 303 LRIMKAMGLAPDLPEDL 253
LRI+K+ GLA DLPEDL
Sbjct: 61 LRILKSKGLASDLPEDL 77
Score = 77.0 bits (181), Expect = 5e-14
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = -2
Query: 253 YYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 137
Y+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 78 YHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,903,074
Number of Sequences: 237096
Number of extensions: 1556643
Number of successful extensions: 3303
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3303
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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