Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30858
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 400 FVNLFLYIVGSQFQPGR 450
           FVN FL+++ +Q   GR
Sbjct: 16  FVNSFLFVIAAQDSSGR 32


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 400 FVNLFLYIVGSQFQPGR 450
           FVN FL+++ +Q   GR
Sbjct: 16  FVNSFLFVIAAQDSSGR 32


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 400 FVNLFLYIVGSQFQPGR 450
           FVN FL+++ +Q   GR
Sbjct: 16  FVNSFLFVIAAQDSSGR 32


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 579 FFFFGFSCCRCQIGDLVKSRKHGSMH 502
           FF    SC R   G+ V S + G++H
Sbjct: 9   FFLLLSSCTRPSRGNAVPSSQRGNVH 34


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 579 FFFFGFSCCRCQIGDLVKSRKHGSMH 502
           FF    SC R   G+ V S + G++H
Sbjct: 9   FFLLLSSCTRPSRGNAVPSSQRGNVH 34


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = -2

Query: 463 PPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           PPQCP   ++D     G    T K    + ++  +A     S P       +D P
Sbjct: 565 PPQCPRFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDKEVEDMP 619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,006
Number of Sequences: 438
Number of extensions: 2586
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)