Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30856
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD2363...   156   2e-38
AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA ...   156   2e-38
AE014134-1139|AAF52423.3|  751|Drosophila melanogaster CG11328-P...    30   3.1  
AE014134-1138|AAN10591.1|  727|Drosophila melanogaster CG11328-P...    30   3.1  

>AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD23634
            protein.
          Length = 998

 Score =  156 bits (379), Expect = 2e-38
 Identities = 72/84 (85%), Positives = 79/84 (94%)
 Frame = +1

Query: 256  IDKIPTQKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLVDFICSKVLAG 435
            ID+IPTQKE+LF YKLD ++ID+ LME+KIRPWINKKIIEYIGEPEPTLVDFICSKVLAG
Sbjct: 896  IDRIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKKIIEYIGEPEPTLVDFICSKVLAG 955

Query: 436  SAPQGVLDDVQMVLDEEAEVFVVK 507
            S PQ +LDDVQMVLDEEAEVFVVK
Sbjct: 956  SPPQSILDDVQMVLDEEAEVFVVK 979



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +3

Query: 510  WRLLIYELEXKRAGL 554
            WRLLIYEL+ K++GL
Sbjct: 981  WRLLIYELDAKKSGL 995


>AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA
            protein.
          Length = 998

 Score =  156 bits (379), Expect = 2e-38
 Identities = 72/84 (85%), Positives = 79/84 (94%)
 Frame = +1

Query: 256  IDKIPTQKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLVDFICSKVLAG 435
            ID+IPTQKE+LF YKLD ++ID+ LME+KIRPWINKKIIEYIGEPEPTLVDFICSKVLAG
Sbjct: 896  IDRIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKKIIEYIGEPEPTLVDFICSKVLAG 955

Query: 436  SAPQGVLDDVQMVLDEEAEVFVVK 507
            S PQ +LDDVQMVLDEEAEVFVVK
Sbjct: 956  SPPQSILDDVQMVLDEEAEVFVVK 979



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +3

Query: 510  WRLLIYELEXKRAGL 554
            WRLLIYEL+ K++GL
Sbjct: 981  WRLLIYELDAKKSGL 995


>AE014134-1139|AAF52423.3|  751|Drosophila melanogaster CG11328-PA,
           isoform A protein.
          Length = 751

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 327 AHGEEDTSMDQQEDHRVHRRAGAHSR 404
           +HG+ D  ++    HR+H  AG+H R
Sbjct: 2   SHGDVDPEVEMTSPHRIHGDAGSHPR 27


>AE014134-1138|AAN10591.1|  727|Drosophila melanogaster CG11328-PB,
           isoform B protein.
          Length = 727

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 327 AHGEEDTSMDQQEDHRVHRRAGAHSR 404
           +HG+ D  ++    HR+H  AG+H R
Sbjct: 2   SHGDVDPEVEMTSPHRIHGDAGSHPR 27


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,532,717
Number of Sequences: 53049
Number of extensions: 303186
Number of successful extensions: 1144
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)