Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30856
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    86   2e-17
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    86   2e-17
Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical pr...    86   2e-17
Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical...    28   6.5  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81522-1|CAB61004.1|  264|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    27   8.6  

>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 34/90 (37%), Positives = 60/90 (66%)
 Frame = +1

Query: 238 ETHQESIDKIPTQKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLVDFIC 417
           E  ++ I  IP  K++LF ++++  Q+D   M  +IRPW+ KK+ +++GE + +  DFIC
Sbjct: 599 ELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFIC 658

Query: 418 SKVLAGSAPQGVLDDVQMVLDEEAEVFVVK 507
            ++   + PQ +L DV +++DE+AE FV+K
Sbjct: 659 DQIEKQATPQEILKDVAVIIDEDAEQFVIK 688


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 34/90 (37%), Positives = 60/90 (66%)
 Frame = +1

Query: 238 ETHQESIDKIPTQKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLVDFIC 417
           E  ++ I  IP  K++LF ++++  Q+D   M  +IRPW+ KK+ +++GE + +  DFIC
Sbjct: 599 ELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFIC 658

Query: 418 SKVLAGSAPQGVLDDVQMVLDEEAEVFVVK 507
            ++   + PQ +L DV +++DE+AE FV+K
Sbjct: 659 DQIEKQATPQEILKDVAVIIDEDAEQFVIK 688


>Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical
           protein W04D2.6b protein.
          Length = 547

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 34/90 (37%), Positives = 60/90 (66%)
 Frame = +1

Query: 238 ETHQESIDKIPTQKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLVDFIC 417
           E  ++ I  IP  K++LF ++++  Q+D   M  +IRPW+ KK+ +++GE + +  DFIC
Sbjct: 441 ELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFIC 500

Query: 418 SKVLAGSAPQGVLDDVQMVLDEEAEVFVVK 507
            ++   + PQ +L DV +++DE+AE FV+K
Sbjct: 501 DQIEKQATPQEILKDVAVIIDEDAEQFVIK 530


>Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical
           protein F55C5.7 protein.
          Length = 848

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 400 LVDFICSKVLAGSAPQGVLDDVQMVLDEEAEV-FVVK 507
           L + +C + LA +AP GVL ++++ + E+  V FV K
Sbjct: 721 LFEMLCGRSLANAAPHGVLRNMELPIPEKVVVSFVAK 757


>Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical
           protein F44F4.9 protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +1

Query: 274 QKEQLFQYKLDASQIDNTLMEKKIRPWINKKIIEYIGEPEPTLV 405
           +  +L Q+KL   Q+     ++ ++P +N+K++E + +P P  V
Sbjct: 58  KNRRLRQFKLSEPQVHIYYKDRDVKPKLNRKVLE-VMDPVPVSV 100


>U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical
           protein C50E3.9 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 277 KEQLFQYKLDASQIDNTLMEKKIRPWI 357
           K++ F +K + + I +T  E+ +RPW+
Sbjct: 76  KKECFNFKGEGTAIPSTFNEETVRPWV 102


>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +3

Query: 270 HAEGTTVPVQTGRLADR*HAHGEEDTSMDQQEDHRVHRRAGAHSRRLH 413
           H  G       G   D  HAH     S D++EDH  H  A  H    H
Sbjct: 76  HDHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHH-HGHAHDHHGHSH 122


>AL023828-15|CAA19460.1|  411|Caenorhabditis elegans Hypothetical
           protein Y17G7B.13 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -1

Query: 432 GEHFAADEVDESGLRLADVLYDLLVDPWTYLLLHERVIDLRGVQFVLEQ 286
           G+   A +VDE G+  A  +Y+ + +     LL +  +   G++ +LEQ
Sbjct: 303 GQILRAQKVDEIGIIQAHAIYETMDNHVKTSLLDKSALTRAGLELILEQ 351


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 258  RQDPHAEGTTVPVQTGRLADR*HAHGEEDTSMDQQEDHRVHRRAGAHSRRLHLQQS 425
            R    + G T+P++ GR      +   ++  MD+ +  R+H++   H  R+  QQ+
Sbjct: 3495 RHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHRSRILEQQN 3550


>Z81522-1|CAB61004.1|  264|Caenorhabditis elegans Hypothetical
           protein F15D3.1b protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 258 RQDPHAEGTTVPVQTGRLADR*HAHGEEDTSMDQQEDHRVHRRAGAHSRRLHLQQS 425
           R    + G T+P++ GR      +   ++  MD+ +  R+H++   H  R+  QQ+
Sbjct: 85  RHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHRSRILEQQN 140


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 258  RQDPHAEGTTVPVQTGRLADR*HAHGEEDTSMDQQEDHRVHRRAGAHSRRLHLQQS 425
            R    + G T+P++ GR      +   ++  MD+ +  R+H++   H  R+  QQ+
Sbjct: 3495 RHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHRSRILEQQN 3550


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 258  RQDPHAEGTTVPVQTGRLADR*HAHGEEDTSMDQQEDHRVHRRAGAHSRRLHLQQS 425
            R    + G T+P++ GR      +   ++  MD+ +  R+H++   H  R+  QQ+
Sbjct: 3495 RHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHRSRILEQQN 3550


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,490,486
Number of Sequences: 27780
Number of extensions: 141139
Number of successful extensions: 458
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)