Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30852
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   171   6e-43
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   171   6e-43
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   171   6e-43
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   171   6e-43
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...    96   2e-20
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    28   8.7  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    28   8.7  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  171 bits (415), Expect = 6e-43
 Identities = 80/84 (95%), Positives = 80/84 (95%)
 Frame = +3

Query: 255 YEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTXMR 434
           YEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT MR
Sbjct: 57  YEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMR 116

Query: 435 GAFGKPQGTVARVRIXQPIMSVXS 506
           GAFGKPQGTVARVRI QPIMSV S
Sbjct: 117 GAFGKPQGTVARVRIGQPIMSVRS 140



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +1

Query: 124 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDD 255
           KNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSD+
Sbjct: 13  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDE 56


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  171 bits (415), Expect = 6e-43
 Identities = 80/84 (95%), Positives = 80/84 (95%)
 Frame = +3

Query: 255 YEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTXMR 434
           YEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT MR
Sbjct: 57  YEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMR 116

Query: 435 GAFGKPQGTVARVRIXQPIMSVXS 506
           GAFGKPQGTVARVRI QPIMSV S
Sbjct: 117 GAFGKPQGTVARVRIGQPIMSVRS 140



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +1

Query: 124 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDD 255
           KNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSD+
Sbjct: 13  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDE 56


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  171 bits (415), Expect = 6e-43
 Identities = 80/84 (95%), Positives = 80/84 (95%)
 Frame = +3

Query: 255 YEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTXMR 434
           YEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT MR
Sbjct: 70  YEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMR 129

Query: 435 GAFGKPQGTVARVRIXQPIMSVXS 506
           GAFGKPQGTVARVRI QPIMSV S
Sbjct: 130 GAFGKPQGTVARVRIGQPIMSVRS 153



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +1

Query: 124 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDD 255
           KNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSD+
Sbjct: 26  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDE 69


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  171 bits (415), Expect = 6e-43
 Identities = 80/84 (95%), Positives = 80/84 (95%)
 Frame = +3

Query: 255 YEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTXMR 434
           YEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT MR
Sbjct: 76  YEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMR 135

Query: 435 GAFGKPQGTVARVRIXQPIMSVXS 506
           GAFGKPQGTVARVRI QPIMSV S
Sbjct: 136 GAFGKPQGTVARVRIGQPIMSVRS 159



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +1

Query: 124 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDD 255
           KNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSD+
Sbjct: 32  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDE 75


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +1

Query: 124 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDD 255
           KNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSD+
Sbjct: 19  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDE 62



 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +3

Query: 384 NKMLSCAGADRLQTXMRGAFGKPQGTVARVRIXQPIMSVXS 506
           NKMLSCAGADRLQT MRGAFGKPQGTVARVRI QPIMSV S
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRS 119


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 37 DPPGCRNSAR 66
          DPPGCRNSAR
Sbjct: 14 DPPGCRNSAR 23


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
           protein.
          Length = 1995

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -3

Query: 244 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 122
           P+ R V S   S+S  S P    G  D   PD+ SI++  Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,690,797
Number of Sequences: 53049
Number of extensions: 517878
Number of successful extensions: 1331
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)