Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30847
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 125 6e-29
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 125 6e-29
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 125 6e-29
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 125 6e-29
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 125 6e-29
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 125 6e-29
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 125 6e-29
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 45 1e-04
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 7 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 66
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 67 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 100
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 92 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIK 314
EDS +KL+TLVTYVPV + K
Sbjct: 96 EDSPNKLYTLVTYVPVTTFK 115
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 125 bits (301), Expect = 6e-29
Identities = 56/94 (59%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 181 FLWSKGVRNVPFXXXXXXXXXXN-DEKIPHISYS 279
+W+KG+RNVP+ N DE P+ Y+
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT 104
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVD 338
EDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 18 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,415,440
Number of Sequences: 237096
Number of extensions: 855369
Number of successful extensions: 1231
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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