Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30847
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical pr...   105   1e-23
Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical pr...    49   1e-06
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    27   6.1  
Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical p...    26   8.1  
Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical p...    26   8.1  
AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like p...    26   8.1  
AC024860-2|AAN84888.1|  173|Caenorhabditis elegans Hypothetical ...    26   8.1  

>Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical
           protein W09C5.6a protein.
          Length = 122

 Score =  105 bits (252), Expect = 1e-23
 Identities = 45/86 (52%), Positives = 64/86 (74%)
 Frame = +1

Query: 1   KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 180
           KK + +   +VTREYT+++H R+ G+G KKRAPRAI EI+KFA+ QM T D+RVDT+LNK
Sbjct: 7   KKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNK 66

Query: 181 FLWSKGVRNVPFXXXXXXXXXXNDEK 258
           F+WSKG++NVP+          N+++
Sbjct: 67  FIWSKGIKNVPYRVRVRLSRRRNEDE 92



 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +3

Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVDASQ 347
           EDSA KL+TL TYVP  +  GL   NVD+ +
Sbjct: 92  EDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 122


>Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical
           protein W09C5.6b protein.
          Length = 70

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +1

Query: 139 MGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDEK 258
           M T D+RVDT+LNKF+WSKG++NVP+          N+++
Sbjct: 1   MKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDE 40



 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +3

Query: 255 EDSAHKLFTLVTYVPVASIKGLQTENVDASQ 347
           EDSA KL+TL TYVP  +  GL   NVD+ +
Sbjct: 40  EDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 70


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 10  QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 132
           +I+H++   +    NL +++ G GF  R  R + +++   E
Sbjct: 171 EINHRKWRVKRDAENLSEQMQGCGFSSRVRREMTDVQNSGE 211


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 10  QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 132
           +I+H++   +    NL +++ G GF  R  R + +++   E
Sbjct: 171 EINHRKWRVKRDAENLSEQMQGCGFSSRVRREMTDVQNSGE 211


>Z82274-12|CAJ76931.1|  304|Caenorhabditis elegans Hypothetical
           protein JC8.12b protein.
          Length = 304

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 LFTLVTYVPVASIKGLQTENVDASQE*TPLV 365
           L+T+  ++ VAS +G+   N D+ +  TP++
Sbjct: 70  LYTISQWITVASFEGIAMPNFDSVKRLTPIL 100


>Z82274-11|CAB54268.2|  315|Caenorhabditis elegans Hypothetical
           protein JC8.12a protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 LFTLVTYVPVASIKGLQTENVDASQE*TPLV 365
           L+T+  ++ VAS +G+   N D+ +  TP++
Sbjct: 81  LYTISQWITVASFEGIAMPNFDSVKRLTPIL 111


>AF324487-1|AAK49908.1|  315|Caenorhabditis elegans JC8.12-like
           protein protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 LFTLVTYVPVASIKGLQTENVDASQE*TPLV 365
           L+T+  ++ VAS +G+   N D+ +  TP++
Sbjct: 81  LYTISQWITVASFEGIAMPNFDSVKRLTPIL 111


>AC024860-2|AAN84888.1|  173|Caenorhabditis elegans Hypothetical
           protein Y71H2AR.3 protein.
          Length = 173

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 70  HGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 162
           + V  K + P+ I++IRKF +  + +PD  V
Sbjct: 126 YNVDSKIKQPQVIEDIRKFVKIHVDSPDSEV 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,070,406
Number of Sequences: 27780
Number of extensions: 149819
Number of successful extensions: 310
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)