Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30846
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 32 1.3
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 32 1.3
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 32 1.3
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 32 1.3
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 32 1.3
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 31 1.7
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 29 7.1
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 29 7.1
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 29 7.1
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 29 7.1
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 7.1
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 29 7.1
AB209256-1|BAD92493.1| 750|Homo sapiens REV3-like, catalytic su... 29 7.1
AJ250562-1|CAB65594.1| 249|Homo sapiens tetraspanin protein pro... 29 9.3
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAENPDDVTK 432
++ AR+ A+L GIRAKR K+AAE DV K
Sbjct: 182 LRMARANARLFGIRAKRAKEAAE--QDVEK 209
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 343 IKQARSIAKLVGIRAKRLKDAAE 411
++ AR+ A+L GIRAKR K+AAE
Sbjct: 39 LRMARANARLFGIRAKRAKEAAE 61
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2400 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2434
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2400 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2434
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2400 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2434
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2400 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2434
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2478 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2512
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta protein.
Length = 3052
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 2400 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 2434
>AB209256-1|BAD92493.1| 750|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta variant protein.
Length = 750
Score = 29.5 bits (63), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 328 NVIFKSFTIHVIHKDVSVDTCRVLKEWVTDFTPIF 224
N F++ + HV+H+ + T RVL +W + T ++
Sbjct: 539 NYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLY 573
>AJ250562-1|CAB65594.1| 249|Homo sapiens tetraspanin protein
protein.
Length = 249
Score = 29.1 bits (62), Expect = 9.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 53 FLFSHFFPFISDCXIKFWTRHSK*YDGTDLKSNLNDHEQTSTSFSFVQHLT 205
F+F H I D ++ +T + Y+G D +S DH Q S S VQ+ T
Sbjct: 110 FVFRHE---IKDTFLRTYTDAMQTYNGNDKRSRAVDHVQRSLSCCGVQNYT 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,135,858
Number of Sequences: 237096
Number of extensions: 1056229
Number of successful extensions: 1512
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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