Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30845
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 42 4e-04
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 35 0.048
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 29 2.4
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 27 9.5
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = +3
Query: 90 RCEVRVPQQGARRGVVRYNGTLAGAKGLWIGVQYDEPLGKNDGSVNGKRYFTCPP 254
RCEV V Q ARRG V Y G +G+W+GV+YDEP+GKNDGSV G RYF C P
Sbjct: 151 RCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDCDP 205
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 257 YGGFVRPAXXIVGDFPEESLD 319
YGGFVRP VGDFPE S+D
Sbjct: 207 YGGFVRPVDVKVGDFPELSID 227
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 129 GVVRYNGTLAGAKGLWIGVQYDEPLGKNDGSVNGKRYFTCPPN 257
G V + G A+G W+GV D GKN+G+V +YF C PN
Sbjct: 16 GRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPN 58
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 126 RGVVRYNGTLAGAKGLWIGVQYDEPLGKNDGSVNGKRYFTCPP 254
+G +RY G + G G++ G++ EP GK+DG+ G YF P
Sbjct: 32 KGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATP 74
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 126 RGVVRYNGTLAGAKGLWIGVQYDEPLGKNDGSVNGKRYFTCPP 254
+G +RY G + G G++ G++ EP GK+DG+ G YF P
Sbjct: 32 KGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATP 74
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +3
Query: 135 VRYNGTLAG-AKGLWIGVQYDEPL-GKNDGSVNGKRYF-TCPPN 257
VRY G + G W+G+++D+P GK+DG V GKRYF T PN
Sbjct: 16 VRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPN 59
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 34.7 bits (76), Expect = 0.048
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +3
Query: 126 RGVVRYNGTLAGAKGLWIGVQYDEPLGKNDGSVNGKRYFTCPPNMEDLFVQXXXXXATSP 305
RG+++Y G L G K L+ GV++ +G G N ++ F FV+ + S
Sbjct: 474 RGIIKYIGFLKGHKTLYAGVEFKNTIGAGTGVFNREQLFLAKDGHAG-FVELSSLESPSS 532
Query: 306 KKAWISTTRYDH 341
+ ST+ H
Sbjct: 533 SISSTSTSSSQH 544
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 223 TDPSFLPSGSSYCTPIQSPLAPA--SVPLYRTTPRRAPCCGTRTSQR 89
T PS+ SY TP + P+AP S P Y P AP T + +
Sbjct: 28 TTPSYPTPPPSYPTPKKYPVAPTYPSTPSYSAQPPPAPSAYTSSDNQ 74
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 235 RLPFTDPSFLPSGSSYCTPIQSPLAPASVPLYRTTPRRAP 116
+LP P+ LP +S CT S + S P R RR P
Sbjct: 159 QLPVNIPTGLPMPASPCTTAASAPSVESTPTKRKRQRRNP 198
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 235 RLPFTDPSFLPSGSSYCTPIQSPLAPASVPLYRTTPRRAP 116
+LP P+ LP +S CT S + S P R RR P
Sbjct: 159 QLPVNIPTGLPMPASPCTTAASAPSVESTPTKRKRQRRNP 198
>AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical
protein Y45F10D.12 protein.
Length = 188
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 216 HRSCRAARRTAPRSKVPWRR 157
H+ R ARRTAP+S+ P+ R
Sbjct: 7 HKHDRVARRTAPKSENPYLR 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,101,329
Number of Sequences: 27780
Number of extensions: 213024
Number of successful extensions: 501
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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