Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30837
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   136   2e-32
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   136   2e-32
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   136   2e-32
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   136   2e-32
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   136   2e-32
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    63   2e-10

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           EEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score =  120 bits (290), Expect = 1e-27
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 254 EKRLKKL 274
           E+ + K+
Sbjct: 61  EEEVDKV 67


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           EEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score =  120 bits (290), Expect = 1e-27
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 254 EKRLKKL 274
           E+ + K+
Sbjct: 61  EEEVDKV 67


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           EEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score =  117 bits (282), Expect = 1e-26
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 254 EKRLKKL 274
           E+ + K+
Sbjct: 61  EEEVDKV 67


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           EEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score =  120 bits (290), Expect = 1e-27
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 254 EKRLKKL 274
           E+ + K+
Sbjct: 61  EEEVDKV 67


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  136 bits (329), Expect = 2e-32
 Identities = 58/70 (82%), Positives = 68/70 (97%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           EEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HR
Sbjct: 62  EEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score =  120 bits (290), Expect = 1e-27
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 254 EKRLKKL 274
           E+ + K+
Sbjct: 61  EEEVDKV 67


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 170 IKGVGRRYSNIVLKKADIDLDKRAGECTEKRLKKL 274
           IKGVGRRYSNIVLKKAD+DL KRAGECTE+ + K+
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKV 35



 Score = 35.9 bits (79), Expect = 0.039
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIP 312
           EEV+K++TI+SNP QYK+P
Sbjct: 30  EEVDKVVTIISNPLQYKVP 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,472,010
Number of Sequences: 53049
Number of extensions: 527195
Number of successful extensions: 1480
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)