Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30837
         (573 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   120   7e-28
Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50858-2|CAD44134.1|  467|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z50858-1|CAA90721.1|  453|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF408757-1|AAO27836.1|  456|Caenorhabditis elegans nucleobindin ...    27   9.5  
AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  120 bits (289), Expect = 7e-28
 Identities = 52/70 (74%), Positives = 61/70 (87%)
 Frame = +1

Query: 256 EEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 435
           E+ +KI+TIM NP QYKIP+WFLNRQKDI DGK  QL S+ +D+KLREDLER+KKIR HR
Sbjct: 62  EDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHR 121

Query: 436 GMRHYWGLRV 465
           G+RHYWGLRV
Sbjct: 122 GLRHYWGLRV 131



 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 43/67 (64%), Positives = 57/67 (85%)
 Frame = +2

Query: 74  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 253
           MSL+IP+KFQHI R+MNTNIDG RKV +A+TAIKGVGRR++ +  +KAD+D++KRAGE T
Sbjct: 1   MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60

Query: 254 EKRLKKL 274
           E+   K+
Sbjct: 61  EEDFDKI 67


>Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical
           protein ZK337.2 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 268 FQPLLCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVR 125
           F+P+L A +S L+ ++  F   ++  PP+ +F        L+F + +R
Sbjct: 492 FKPILSASSSNLLSVSSPFQSLSLSTPPSPSFAPIVLNRQLSFDVTMR 539


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 309 YLILPRIRHDSDNFFNLFSVHSP 241
           YL + +   + +NFF +F+VHSP
Sbjct: 316 YLTITKNSQEMENFFLIFNVHSP 338


>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 244 RMHREEVEKIITIMSNPRQYKIP 312
           R HR++VE +  +M  PR YK P
Sbjct: 385 RKHRQQVELLSELMLQPRIYKAP 407


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 289 NPRQYKIPDWFLNRQKDIVDGKYS-QLTSSNLDSKLREDL 405
           NP  YK+ D++ N+  +++  K + +L S++L  K +++L
Sbjct: 40  NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79


>Z50858-2|CAD44134.1|  467|Caenorhabditis elegans Hypothetical
           protein F44A6.1b protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +1

Query: 244 RMHREEVEKII-------TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED 402
           + H+E++ K+I        +M   R+     + + +Q +  D K +Q+T    +    E 
Sbjct: 161 KFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAE-EDHKLAQMTPEEREKAKSEH 219

Query: 403 LERLKKIRAHRGMRH 447
            E LK+   H  ++H
Sbjct: 220 EESLKRHNDHEKLKH 234


>Z50858-1|CAA90721.1|  453|Caenorhabditis elegans Hypothetical
           protein F44A6.1a protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +1

Query: 244 RMHREEVEKII-------TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED 402
           + H+E++ K+I        +M   R+     + + +Q +  D K +Q+T    +    E 
Sbjct: 161 KFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAE-EDHKLAQMTPEEREKAKSEH 219

Query: 403 LERLKKIRAHRGMRH 447
            E LK+   H  ++H
Sbjct: 220 EESLKRHNDHEKLKH 234


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 157  CDDGYQRCWPEVLQHCS 207
            C + YQ CWP +L  CS
Sbjct: 1512 CREYYQICWPPILLACS 1528


>AF408757-1|AAO27836.1|  456|Caenorhabditis elegans nucleobindin
           protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +1

Query: 244 RMHREEVEKII-------TIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED 402
           + H+E++ K+I        +M   R+     + + +Q +  D K +Q+T    +    E 
Sbjct: 164 KFHKEDLRKLIQKTVADMNVMDEQRKDDFKQYEMKKQAE-EDHKLAQMTPEEREKAKSEH 222

Query: 403 LERLKKIRAHRGMRH 447
            E LK+   H  ++H
Sbjct: 223 EESLKRHNDHEKLKH 237


>AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical
           protein C30F12.6 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 238 CWRMHREEVEKIITIMSNPRQYKIPDWFLNRQKDIV 345
           CW  +R  V    + +S+P+    PDW++N  K +V
Sbjct: 293 CWLPYRGMVV-YNSFVSDPKYSWSPDWYINLSKTLV 327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,618
Number of Sequences: 27780
Number of extensions: 274487
Number of successful extensions: 809
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)