Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30836
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891...    30   1.7  
01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    30   1.7  
11_03_0099 - 9983044-9983052,9983145-9983939,9984031-9984301,998...    29   5.3  
09_06_0150 - 21225086-21225511,21225775-21226125,21227180-212277...    29   5.3  
04_04_0688 - 27288308-27288366,27288475-27288595,27288888-272889...    29   5.3  
01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976     28   7.0  
05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354           28   9.2  
04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539     28   9.2  

>02_05_0329 -
           27986261-27987372,27988632-27988638,27988999-27989128,
           27989157-27989216,27989318-27989970,27990056-27990526
          Length = 810

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 252 PDCCACDDAKYRMVFEGLWSP-QTHPKNFPTQALWLTHFSDVIGATHPKNFTFW 410
           P C     A YR  + G W P    P     +  ++   SDVI AT PK+ + W
Sbjct: 496 PSCHGLGSAPYRR-YGGFWYPAHLMPATLAARDTFVARPSDVILATMPKSGSTW 548


>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 206 SSANQRLAFSYTIAFKSTHPEPAGGAFHMTWTSVLGRSSASTTEFVHS 63
           S   Q++   Y    KSTHP+    + H   T+VLG    S    +H+
Sbjct: 87  SHLKQKIKPFYHFKGKSTHPDDVIASHHDMLTTVLGSKEDSLASIIHN 134


>11_03_0099 -
           9983044-9983052,9983145-9983939,9984031-9984301,
           9984857-9985056
          Length = 424

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 318 THPKNFPTQALWLTHFSDVIGATHPKNFTFWGE 416
           TH ++    + WL + +D I     KN  +WG+
Sbjct: 150 THEEDIRLVSAWLNNLNDSINGNFKKNDCYWGD 182


>09_06_0150 -
           21225086-21225511,21225775-21226125,21227180-21227718,
           21227813-21227929,21228038-21228290
          Length = 561

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 316 CGDQSPSNTILYLASSQAQQSGWTETCPRRFVWSTDR--LQRTNDSHFHTPSPSKA 155
           CG  SPS  +    +S    +  T T  RRF  S+ R     ++ S   TP PS A
Sbjct: 15  CGSYSPSADVSESETSSDCSAPTTTTTTRRFASSSSRGVASSSSSSLLPTPPPSSA 70


>04_04_0688 -
           27288308-27288366,27288475-27288595,27288888-27288942,
           27289041-27289156,27289548-27289616,27289975-27290084,
           27290222-27290306
          Length = 204

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 346 AWVGKFFGCVCGDQSPSNTILYLASSQAQQ 257
           AW+G+ F CVC  +  S+  +    S AQ+
Sbjct: 37  AWIGRGFSCVCAQRRDSDQRISFDLSPAQE 66


>01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976
          Length = 363

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -2

Query: 280 LASSQAQQSG----WTETCPRRFVWSTDRLQRTNDSHFHTPSPS 161
           L+SS +  SG    +T  CP R V+ST  LQ  N S    P PS
Sbjct: 121 LSSSPSSSSGDLFEFTSPCPVRRVFSTGDLQGMNGSSPPRPLPS 164


>05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354
          Length = 542

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 308 PEPLEHHPIFSVVAGAAVGMDRDVSSQI 225
           P PL++HP +SVV    V  D  V+ +I
Sbjct: 79  PNPLQNHPAYSVVKQYFVNADDTVAKKI 106


>04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539
          Length = 585

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 659 PVHSLPPPSQEMDQT*KQERGNAS 588
           PVH++PPP Q+  Q  + + G A+
Sbjct: 547 PVHAVPPPPQQQQQPEEGQAGGAA 570


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,155,113
Number of Sequences: 37544
Number of extensions: 529702
Number of successful extensions: 1614
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)