Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30836
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 94 8e-20
U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 29 2.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 4.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 4.7
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 4.7
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 6.2
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 6.2
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 6.2
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 6.2
Z82081-1|CAB04961.2| 396|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical... 28 8.2
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 94.3 bits (224), Expect = 8e-20
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +2
Query: 515 IVKAQGLWHPRVNSNTSAAFTVDKKRHYLSLASMFGPSPDWVVGVSGLDLCQKDCSWVES 694
++K +GLW P V T + F V+K H++SLA+MFGPSPDW VG+S ++LC DC+W E
Sbjct: 276 LMKVKGLWFPDVQGTTKSQFVVNKYHHFVSLATMFGPSPDWCVGLSSVNLCLPDCTWAEE 335
Query: 695 KIIDLYPYDAG 727
+ +L P+DAG
Sbjct: 336 RTFELQPFDAG 346
Score = 90.6 bits (215), Expect = 1e-18
Identities = 35/78 (44%), Positives = 54/78 (69%)
Frame = +3
Query: 258 CCACDDAKYRMVFEGLWSPQTHPKNFPTQALWLTHFSDVIGATHPKNFTFWGEGQLASDG 437
CCACD A+Y + F G+WS THPK++PT LTHF+D++G++H N++ W G +++DG
Sbjct: 191 CCACDIAQYDLEFTGIWSKNTHPKDYPTLE-HLTHFTDMLGSSHSSNYSLWTIGGISTDG 249
Query: 438 FRSLAEWGSVGLMERELR 491
+ +AEWG+ E E +
Sbjct: 250 MKEIAEWGNTYKAEAEAK 267
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 67 CTNSVVEADDLP-KTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRIC--ED 237
C S V +L KT V +MWKAP SGCV+ +A V E WF E LT ++C +
Sbjct: 118 CRQSGVSHANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKLCIQKG 177
Query: 238 TSLSIPTAAPATT 276
T + P P+ T
Sbjct: 178 TQILKPVDDPSAT 190
>U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical
protein ZK381.2 protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 324 PKNFPTQALWLTHFSDVIGATHPKNFTFWG 413
PKN+PT +L F+ V+ A KN+ F+G
Sbjct: 270 PKNYPT---YLEEFNSVLAANPGKNYLFYG 296
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 73 NSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTSLSI 252
N+ E DD PK + +K L AM+ NA ++ E Q + +D +++
Sbjct: 111 NTFFEVDDAPKNASSINFKLGGESYTVEALTAMILANAKKFTEEYAQAAE--IKDVVITV 168
Query: 253 PT-AAPATTLNIGWCSRGSGL 312
P PA L + ++ +GL
Sbjct: 169 PVYFTPAERLAVERAAQMAGL 189
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 285 RMVFEG-LWSPQTHPKNFPTQALWLTHFSDVIGATHPKNFTFW 410
++V +G +W P PKN T +DV+ AT+PK T W
Sbjct: 59 QVVIDGEIWPPIFKPKNVRTAKSMQFGETDVVIATYPKCGTTW 101
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 2618 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2676
Query: 178 E 180
E
Sbjct: 2677 E 2677
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 3147 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 3205
Query: 178 E 180
E
Sbjct: 3206 E 3206
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 2828 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2886
Query: 178 E 180
E
Sbjct: 2887 E 2887
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 2618 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2676
Query: 178 E 180
E
Sbjct: 2677 E 2677
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 3147 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 3205
Query: 178 E 180
E
Sbjct: 3206 E 3206
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 2828 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2886
Query: 178 E 180
E
Sbjct: 2887 E 2887
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 4 APSKQGQFQLFADTLTK--FDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVY 177
A + + F TL K FD+ + E D K V + WK PPA G ++ V
Sbjct: 2037 AEGESDPLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWK-PPANDGGAPIEEYVV 2095
Query: 178 E 180
E
Sbjct: 2096 E 2096
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 82 VEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTSLSIPTA 261
+ +D+ T+V + W+APP + YE + + Q T T I
Sbjct: 1405 LRTEDIRPTDVSISWQAPPCLQTNGEITEYEYEVTAGDRRQTVQKTTENIRGTRAKIENL 1464
Query: 262 APATTLNI---GWCSRGSG 309
P T N+ + +RG+G
Sbjct: 1465 QPQTRYNVKVRAYTARGAG 1483
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 82 VEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTSLSIPTA 261
+ +D+ T+V + W+APP + YE + + Q T T I
Sbjct: 1405 LRTEDIRPTDVSISWQAPPCLQTNGEITEYEYEVTAGDRRQTVQKTTENIRGTRAKIENL 1464
Query: 262 APATTLNI---GWCSRGSG 309
P T N+ + +RG+G
Sbjct: 1465 QPQTRYNVKVRAYTARGAG 1483
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 82 VEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTSLSIPTA 261
+ +D+ T+V + W+APP + YE + + Q T T I
Sbjct: 1405 LRTEDIRPTDVSISWQAPPCLQTNGEITEYEYEVTAGDRRQTVQKTTENIRGTRAKIENL 1464
Query: 262 APATTLNI---GWCSRGSG 309
P T N+ + +RG+G
Sbjct: 1465 QPQTRYNVKVRAYTARGAG 1483
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 82 VEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTSLSIPTA 261
+ +D+ T+V + W+APP + YE + + Q T T I
Sbjct: 1405 LRTEDIRPTDVSISWQAPPCLQTNGEITEYEYEVTAGDRRQTVQKTTENIRGTRAKIENL 1464
Query: 262 APATTLNI---GWCSRGSG 309
P T N+ + +RG+G
Sbjct: 1465 QPQTRYNVKVRAYTARGAG 1483
>Z82081-1|CAB04961.2| 396|Caenorhabditis elegans Hypothetical
protein W09H1.1a protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 269 AGAAVGMDRDVSSQIR-LVN*PSSANQRLAFSYTIAFKSTHPEPAGGAFHMTWTSVLGRS 93
AG+ G+D S QI L+N ++ N+ L + S P P+ A + SV+ +
Sbjct: 24 AGSTPGLD---SKQIHSLINKNNTFNRILCKNADTVADSPTPTPSLTASRSS--SVISIA 78
Query: 92 SASTTEFVHSSSNLVKVS 39
S +TE V SS L+KV+
Sbjct: 79 STVSTETVVSSGRLIKVA 96
>Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical
protein F20G2.4 protein.
Length = 396
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -1
Query: 173 TIAFKSTHPEPAGGAFHMTWTSVLGRSSASTTEFVHSSSNLVKVSAKSWN 24
TI+F + PEP F+ T+ + G ++++ + N++ + +WN
Sbjct: 284 TISF-NYKPEPVSDGFYSTFVYITGEANSTIEITMEGLENVICTAGCTWN 332
>AF016684-12|AAB66204.1| 291|Caenorhabditis elegans Hypothetical
protein F45C12.4 protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 294 FEGLWSPQTHPKNFPTQALWLTHFSDVIGATHPKNFTFWGEGQLASDGFRSLAEWGSVGL 473
F L+S + H K+ P + + F +I HP + F + ++ SLA+ S+
Sbjct: 158 FSDLFSREAHSKDIPIEGVTYFEFGLLISCIHPDHTVFPNDETVSK--LLSLADRFSMRA 215
Query: 474 MERELRQH 497
+ R + H
Sbjct: 216 VYRMVEHH 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,283,747
Number of Sequences: 27780
Number of extensions: 401447
Number of successful extensions: 1234
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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