Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30832
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006761-5|AAF60550.3| 425|Caenorhabditis elegans Hypothetical ... 38 0.005
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 31 0.79
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 30 1.0
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 30 1.4
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 30 1.4
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 30 1.4
AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical ... 30 1.4
AF040642-1|AAN73871.2| 272|Caenorhabditis elegans Hypothetical ... 29 2.4
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 29 3.2
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 29 3.2
U39999-10|AAA81108.2| 306|Caenorhabditis elegans Serpentine rec... 28 4.2
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81576-4|CAB04642.1| 309|Caenorhabditis elegans Hypothetical pr... 28 5.6
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 7.4
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 27 7.4
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 9.7
U13019-16|AAK84569.1| 311|Caenorhabditis elegans Serpentine rec... 27 9.7
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 27 9.7
AF040641-5|AAB94944.1| 379|Caenorhabditis elegans Hypothetical ... 27 9.7
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 27 9.7
>AC006761-5|AAF60550.3| 425|Caenorhabditis elegans Hypothetical
protein Y41G9A.3 protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 2 VHRLXXXXXXXXXIGIISLSDLLMYLVLRPTGECGVTS 115
VHR+ GIISLSD++ +LVLRPT + GVT+
Sbjct: 382 VHRIFMVDDRTILKGIISLSDVIEFLVLRPTKKNGVTT 419
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 140 EEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQCQE 250
E+K EN N E +S DDK SKE D +E+T+ ++
Sbjct: 98 EDKKENENDEKKEKSKDDKKEESKE--DKKEKTKTED 132
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 2 VHRLXXXXXXXXXIGIISLSDLLMYLVLRP 91
VHRL +G++SLSD+L LVL P
Sbjct: 478 VHRLIVTDQDKKVVGVVSLSDILKNLVLDP 507
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 122 NEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQC 244
+E + E++EN +D+ +D + +E +D EERT C
Sbjct: 229 DEESESHEEEENSESDDLPRKVEDDD-LEEEDEDEEERTPC 268
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 122 NEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQC 244
+E + E++EN +D+ +D + +E +D EERT C
Sbjct: 2401 DEESESHEEEENSESDDLPRKVEDDD-LEEEDEDEEERTPC 2440
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 122 NEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQC 244
+E + E++EN +D+ +D + +E +D EERT C
Sbjct: 2429 DEESESHEEEENSESDDLPRKVEDDD-LEEEDEDEEERTPC 2468
>AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical
protein Y62E10A.6 protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 498 TTASTKISRRNTNHRYMYVDEKNIFYGLNAIRYLVHKIPKKKITDCNPLITAAILNIN 325
T + K+ R+ + V I GL ++ H+IP+K I D N + I+ N
Sbjct: 253 TESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRIPEKIIADSNGKVQEIIVKNN 310
>AF040642-1|AAN73871.2| 272|Caenorhabditis elegans Hypothetical
protein C50D2.6 protein.
Length = 272
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 352 NHRGHFEYQCKQNGVVMEIAKPLTK 278
N R HFE CK+ G ++E +P+T+
Sbjct: 159 NLRSHFEMLCKKLGSMIECVEPVTR 183
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 122 NEHAPIEEKDENLNPEDVAES-GDDKSTVSKEQDDSEERTQCQE 250
NE E+K++ E+ E GDD+ T + +DD E+ + E
Sbjct: 411 NEGDKEEDKEDKKESEEEEEKDGDDEETTTTSEDDEEKDSNSDE 454
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 122 NEHAPIEEKDENLNPEDVAES-GDDKSTVSKEQDDSEERTQCQE 250
NE E+K++ E+ E GDD+ T + +DD E+ + E
Sbjct: 411 NEGDKEEDKEDKKESEEEEEKDGDDEETTTTSEDDEEKDSNSDE 454
>U39999-10|AAA81108.2| 306|Caenorhabditis elegans Serpentine
receptor, class x protein95 protein.
Length = 306
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +2
Query: 311 AILFALIFKMAAVINGLQSVIFFFGILCTRYLIAFSP*KIF---FSSTYIYLWL---VFL 472
AIL ALI + +N + F FGI FS K F + + ++ WL VF
Sbjct: 20 AILLALISLVGGAVNAYIASGFMFGIKFRGGFFIFSISKAFSNILTCSLVFFWLVPAVFA 79
Query: 473 REIFVDAVVN 502
R+ V VN
Sbjct: 80 RDNLVSNYVN 89
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 131 APIEEKDENLNPEDVAESGDDKSTVSKEQDDSEE 232
AP EK++N++ + + S DKS++S D EE
Sbjct: 73 APTIEKEKNISGDLLDFSSSDKSSLSSRPDSPEE 106
>Z81576-4|CAB04642.1| 309|Caenorhabditis elegans Hypothetical
protein R10E8.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 302 HHDAILFALIFKMAAVINGLQSVIFFFGILCTRYL 406
H DAI F + M ++ + + +FGI C +Y+
Sbjct: 172 HPDAISFLCVAVMFLILGSSFASVIYFGIKCYQYI 206
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 2 VHRLXXXXXXXXXIGIISLSDLLMYLVLRP 91
VHRL G+ISLSD++ ++V++P
Sbjct: 326 VHRLCAVNEHGGIEGVISLSDVINFMVVQP 355
>Z93397-3|CAB07720.2| 376|Caenorhabditis elegans Hypothetical
protein ZC482.6 protein.
Length = 376
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 361 TVSNFFF-WNLMYKISDC 411
T+ N F WN++YK+ DC
Sbjct: 96 TICNLFMEWNIVYKVEDC 113
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 140 EEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
EE++E+ E+ E D++ +E+DDSE
Sbjct: 607 EEEEEDDEDEESEEESDEEDEEEEEEDDSE 636
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 140 EEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
EE++E+ E+ E D++ +E+DDSE
Sbjct: 617 EEEEEDDEDEESEEESDEEDEEEEEEDDSE 646
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/55 (21%), Positives = 31/55 (56%)
Frame = +1
Query: 358 ITVSNFFFWNLMYKISDCIQSVKNIFFIYIHISMVGVPS*NLCRRGCELILYAII 522
ITV FF + ++K+ + ++ +F++I +S +G+ ++ RR ++ + +
Sbjct: 323 ITVGWIFFCSALFKLWEDWSYGQSCYFMFISLSTIGLGDVSVQRRDMMVLCFVFV 377
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/55 (21%), Positives = 31/55 (56%)
Frame = +1
Query: 358 ITVSNFFFWNLMYKISDCIQSVKNIFFIYIHISMVGVPS*NLCRRGCELILYAII 522
ITV FF + ++K+ + ++ +F++I +S +G+ ++ RR ++ + +
Sbjct: 323 ITVGWIFFCSALFKLWEDWSYGQSCYFMFISLSTIGLGDVSVQRRDMMVLCFVFV 377
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 131 APIEEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQCQ 247
AP E+ E+ +D E DD+ V + +++ER + Q
Sbjct: 3758 APKEDPKEDGKEDDQVEEDDDQENVDERDRENDERPEDQ 3796
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 119 RNEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
++E E +E L+ ED+ E D+ + +EQ++SE
Sbjct: 560 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESE 596
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 119 RNEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
++E E +E L+ ED+ E D+ + +EQ++SE
Sbjct: 560 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESE 596
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 119 RNEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
++E E +E L+ ED+ E D+ + +EQ++SE
Sbjct: 560 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESE 596
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 119 RNEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
++E E +E L+ ED+ E D+ + +EQ++SE
Sbjct: 560 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESE 596
>U13019-16|AAK84569.1| 311|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 6 protein.
Length = 311
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 70 NVSCPTSYRRVWRHQLT 120
N+ P YRR+W+H LT
Sbjct: 133 NLLKPNDYRRIWKHGLT 149
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 140 EEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQCQE 250
EEK+ N E +E ++ + SKE+ +EE ++ E
Sbjct: 404 EEKETKKNEEKKSEDKSEEKSESKEEPKNEESSETPE 440
>AF040641-5|AAB94944.1| 379|Caenorhabditis elegans Hypothetical
protein D1069.4 protein.
Length = 379
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 305 HDAILFALIFKMAAVINGLQSVIFFFGILCTRYLIAFSP*KIFFSST-YIYLWLVFLR 475
H A+L + AV + L +V F I T Y I + + + Y Y+WLVFL+
Sbjct: 53 HIAVLSRPRMRRCAVNSVLTAVAFCDVITMTSYSIYLMRFRFYETDHGYSYIWLVFLK 110
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 119 RNEHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSE 229
++E E +E L+ ED+ E D+ + +EQ++SE
Sbjct: 564 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESE 600
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,632,828
Number of Sequences: 27780
Number of extensions: 258551
Number of successful extensions: 1020
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -