Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30831
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 30 1.4
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 30 1.4
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 30 1.4
Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical pr... 29 2.5
U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical p... 29 3.3
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical pr... 28 5.7
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr... 28 7.5
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL023828-19|CAA19464.2| 293|Caenorhabditis elegans Hypothetical... 27 9.9
AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical ... 27 9.9
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 310 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 435
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 85 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 126
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 310 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 435
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 102 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 143
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 310 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 435
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 214 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 255
>Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical
protein M142.5 protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 400 SACLDPEGQRLFMAIARVIDDVSWAGQSIRV 492
S + GQ+ ++ + R I D W G+ IRV
Sbjct: 116 SPAISIRGQQAYLQLKRTIPDTCWCGEDIRV 146
>U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical
protein C45G9.10b protein.
Length = 805
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +3
Query: 27 HQNITIHYSIETKTFINP*TCRPSF--RTASRSAV*SPRAP----VITKTSKERS*LSIL 188
+QN +HY I ++TF P T P++ T S +P +P +I +KER ++
Sbjct: 609 NQNFRVHYQIGSRTFERPQTTSPTYIPVTTSYPPTTNPPSPALPNLIDFLNKERENVNFK 668
Query: 189 KQKC*F*NANRPAAIRNGTTSIREPVP 269
NGTT+I +P
Sbjct: 669 YDSTELAMICSYEIFENGTTTITRVLP 695
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical protein
C45G9.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +3
Query: 27 HQNITIHYSIETKTFINP*TCRPSF--RTASRSAV*SPRAP----VITKTSKERS*LSIL 188
+QN +HY I ++TF P T P++ T S +P +P +I +KER ++
Sbjct: 775 NQNFRVHYQIGSRTFERPQTTSPTYIPVTTSYPPTTNPPSPALPNLIDFLNKERENVNFK 834
Query: 189 KQKC*F*NANRPAAIRNGTTSIREPVP 269
NGTT+I +P
Sbjct: 835 YDSTELAMICSYEIFENGTTTITRVLP 861
>Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical
protein H03G16.5 protein.
Length = 227
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 292 KEVST--VPEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLD 414
KE+S V + ++NL RL TRV I+NK L+ A L+
Sbjct: 65 KEISKKKVFKMDDTMNLLRLGTRVHLIIQNKEELIDKYKAMLE 107
>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical
protein ZK370.4b protein.
Length = 1353
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 172 PSFRSS-NKNVDSEMPIVQRQSETARRQYVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLN 348
PS R+S NK ++P + VN S S + T+ EPP SLNL+ +N
Sbjct: 59 PSSRNSPNKERSKKVPTILETDNEDDEIRVNGSPKSGTPTNTQ--TI-EPPTSLNLNMVN 115
Query: 349 TRVRNSIENKRRL 387
+ +++ RR+
Sbjct: 116 SASGSNLSGARRM 128
>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical
protein ZK370.4a protein.
Length = 1342
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 172 PSFRSS-NKNVDSEMPIVQRQSETARRQYVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLN 348
PS R+S NK ++P + VN S S + T+ EPP SLNL+ +N
Sbjct: 59 PSSRNSPNKERSKKVPTILETDNEDDEIRVNGSPKSGTPTNTQ--TI-EPPTSLNLNMVN 115
Query: 349 TRVRNSIENKRRL 387
+ +++ RR+
Sbjct: 116 SASGSNLSGARRM 128
>AL023828-19|CAA19464.2| 293|Caenorhabditis elegans Hypothetical
protein Y17G7B.17 protein.
Length = 293
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 535 LYGGVIITWVFCYCILGCSVRPRTRRQSL*LSP*TVF--VLQGLGMRIMLIP 386
++GG+++ F G +P RRQ L ++P F +L GLG M++P
Sbjct: 44 MFGGLMVPSPFGAITDGSGQQPSRRRQELEMNPFAPFGGLLGGLGGMGMMMP 95
>AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.2 protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 188 EDRKLGPLLRCFRYNRCAWRLYCRS*SSPKRRPTCLRVDKRFCFN*IMYGYILVSFSVLL 9
ED ++G L C Y+R W+ + +CL F +++GYI VS +L+
Sbjct: 472 EDDRIGSLPNCSSYSRTIWKFF----DMDYAEASCLIRSSAMPF--LVFGYIFVSGILLV 525
>AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.6 protein.
Length = 778
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 188 EDRKLGPLLRCFRYNRCAWRLYCRS*SSPKRRPTCLRVDKRFCFN*IMYGYILVSFSVLL 9
ED ++G L C Y+R W+ + +CL F +++GYI VS +L+
Sbjct: 472 EDDRIGSLPNCSSYSRTIWKFF----DMDYAEASCLIRSSAMPF--LVFGYIFVSGILLV 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,114,827
Number of Sequences: 27780
Number of extensions: 344295
Number of successful extensions: 818
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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