Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30829
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 132 3e-31
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 132 3e-31
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 132 3e-31
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.93
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 0.93
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 31 0.93
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.6
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 2.1
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 2.1
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 29 5.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 5.0
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 8.7
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 132 bits (319), Expect = 3e-31
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 210 CRIQIP*GTR*GVHECNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 389
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 254 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 313
Query: 390 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNG 503
F LS DWQVDYESY W KLD S+ TKK V +Y W G
Sbjct: 314 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG 351
Score = 92.3 bits (219), Expect = 4e-19
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 82 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSV 258
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMS
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 269
Query: 259 TLL 267
L+
Sbjct: 270 NLI 272
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 132 bits (319), Expect = 3e-31
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 210 CRIQIP*GTR*GVHECNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 389
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 262 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 321
Query: 390 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNG 503
F LS DWQVDYESY W KLD S+ TKK V +Y W G
Sbjct: 322 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG 359
Score = 92.3 bits (219), Expect = 4e-19
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 82 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSV 258
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMS
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 277
Query: 259 TLL 267
L+
Sbjct: 278 NLI 280
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 132 bits (319), Expect = 3e-31
Identities = 57/98 (58%), Positives = 68/98 (69%)
Frame = +3
Query: 210 CRIQIP*GTR*GVHECNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 389
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 287 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 346
Query: 390 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNG 503
F LS DWQVDYESY W KLD S+ TKK V +Y W G
Sbjct: 347 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG 384
Score = 92.3 bits (219), Expect = 4e-19
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 82 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSV 258
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMS
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 302
Query: 259 TLL 267
L+
Sbjct: 303 NLI 305
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 385 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 275
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 385 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 275
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 115 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSVT 261
D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S T
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRT 90
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 393 PLSSDWQVDYESYDWKKL 446
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 388 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 275
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 388 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 275
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 417 DYESYDWKKL---DPSSEETKKLVQDYFSWNGTEKTVESSTR 533
D E D+K++ DP+ EE ++LV D+F +G + +E+ ++
Sbjct: 154 DVEFNDYKEVMRPDPTREELQQLVIDHFLHHGYSEVIETFSK 195
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 361 CGCGAERSSCSRCRLIGRWTTSPTTG 438
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 292 KCANRLSHPSACLVKTTIPPSPECGCGAERSSCSRCRLIGRWTTSPTTG 438
KC+ + + + +P + CGC A S + CR R T S + G
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 8.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 145 DEAKSIPYFWEKFDPENYSIWYAEY 219
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 325 CLVKTTIPPSPECGCGAERSS 387
C + PP P+CGCG ++ S
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,414,119
Number of Sequences: 27780
Number of extensions: 384966
Number of successful extensions: 1295
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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