Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30822
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 137 9e-33
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 127 7e-30
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 107 1e-23
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 106 1e-23
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 104 6e-23
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 104 8e-23
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 102 2e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 79 3e-15
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 58 7e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 33 0.22
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 33 0.22
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 0.38
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 0.38
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 0.38
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 32 0.38
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.2
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 30 2.1
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 30 2.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 2.7
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 29 2.7
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 3.6
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 4.7
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 4.7
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 29 4.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.3
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 6.3
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 28 6.3
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.3
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 28 8.3
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 28 8.3
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 28 8.3
AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division... 28 8.3
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 137 bits (331), Expect = 9e-33
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTFDIDANGILNVSA +KST K+NKITITNDKGRLSK++IERMVNEAEKY+ +D+ QK
Sbjct: 475 IEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQK 534
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ I AKN LESY F++K T+EDEK
Sbjct: 535 DRIGAKNGLESYAFNLKQTIEDEK 558
Score = 118 bits (283), Expect = 6e-27
Identities = 56/73 (76%), Positives = 59/73 (80%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL
Sbjct: 403 GIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL 462
Query: 221 TGIPPAPRGVPQL 259
+GIPPAPRGVPQ+
Sbjct: 463 SGIPPAPRGVPQI 475
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 510 KEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGVP 689
K+KIS DK+ I DKC++ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ AGG P
Sbjct: 560 KDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAP 619
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 127 bits (307), Expect = 7e-30
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTFDIDANGILNVSA +KST K +ITITNDK R SK++IERMVNEAEKY+ +D+ QK
Sbjct: 475 IEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFSKDDIERMVNEAEKYKADDEAQK 534
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ I AKN LESY F++K T+EDEK
Sbjct: 535 DRIGAKNGLESYAFNLKQTIEDEK 558
Score = 118 bits (283), Expect = 6e-27
Identities = 56/73 (76%), Positives = 59/73 (80%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL
Sbjct: 403 GIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL 462
Query: 221 TGIPPAPRGVPQL 259
+GIPPAPRGVPQ+
Sbjct: 463 SGIPPAPRGVPQI 475
Score = 84.6 bits (200), Expect = 7e-17
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = +3
Query: 510 KEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGVP 689
K+KIS DK+ I DKC++ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ AGG P
Sbjct: 560 KDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQSAGGAP 619
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 109 bits (263), Expect = 2e-24
Identities = 48/82 (58%), Positives = 68/82 (82%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA+++ ED +Q+
Sbjct: 475 IEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQR 534
Query: 436 ETIQAKNALESYCFSMKSTMED 501
E +QA+N LE+Y F +K +++
Sbjct: 535 ERVQARNQLEAYAFQIKQALDE 556
Score = 103 bits (248), Expect = 1e-22
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL
Sbjct: 403 GIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFEL 462
Query: 221 TGIPPAPRGVPQL 259
+GIPPAPRGVPQ+
Sbjct: 463 SGIPPAPRGVPQI 475
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 504 EAKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 671
E K+S D + ++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 556 EYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 109 bits (263), Expect = 2e-24
Identities = 48/82 (58%), Positives = 68/82 (82%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTFDIDANGILNVSA +KST K N+ITI N+KGRL++ +I+RMV+EA+++ ED +Q+
Sbjct: 475 IEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQR 534
Query: 436 ETIQAKNALESYCFSMKSTMED 501
E +QA+N LE+Y F +K +++
Sbjct: 535 ERVQARNQLEAYAFQIKQALDE 556
Score = 103 bits (248), Expect = 1e-22
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL
Sbjct: 403 GIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFEL 462
Query: 221 TGIPPAPRGVPQL 259
+GIPPAPRGVPQ+
Sbjct: 463 SGIPPAPRGVPQI 475
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 504 EAKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 671
E K+S D + ++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 556 EYSSKLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 107 bits (256), Expect = 1e-23
Identities = 47/84 (55%), Positives = 68/84 (80%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IERM+N+AEK+ +D K K
Sbjct: 502 IEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVK 561
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ +A+N LESY +++K+ +ED++
Sbjct: 562 DKAEARNELESYAYNLKNQIEDKE 585
Score = 97.5 bits (232), Expect = 9e-21
Identities = 47/73 (64%), Positives = 52/73 (71%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+L
Sbjct: 430 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDL 489
Query: 221 TGIPPAPRGVPQL 259
TG+PPAPRGVPQ+
Sbjct: 490 TGLPPAPRGVPQI 502
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 516 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAG 680
K+ + DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+ AG
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKDAG 644
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 106 bits (255), Expect = 1e-23
Identities = 46/82 (56%), Positives = 66/82 (80%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
++VTFDIDANGILNVSA +KST + N+ITI N+KGRLS+ +I+RMVNEA+++ ED Q+
Sbjct: 475 VDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLSQADIDRMVNEAKQFEREDAAQR 534
Query: 436 ETIQAKNALESYCFSMKSTMED 501
+ I ++N LE+Y F +K +E+
Sbjct: 535 DRISSRNQLEAYAFQVKQALEE 556
Score = 105 bits (251), Expect = 5e-23
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL
Sbjct: 403 GIETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFEL 462
Query: 221 TGIPPAPRGVPQL 259
TGIPPAPRGVPQ+
Sbjct: 463 TGIPPAPRGVPQV 475
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 519 ISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 671
+S D + D DT++W++ N LADK+E E K KEL+ I I+TKM+Q
Sbjct: 561 LSAEDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 104 bits (250), Expect = 6e-23
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTF+ID NGIL+V+A +K T +NKITITND+ RLS E+IE M+N+AEK+ +D K K
Sbjct: 502 IEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDAEKFAEDDKKVK 561
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ +A+N LESY +++K+ +ED++
Sbjct: 562 DKAEARNELESYAYNLKNQIEDKE 585
Score = 97.5 bits (232), Expect = 9e-21
Identities = 47/73 (64%), Positives = 52/73 (71%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+L
Sbjct: 430 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDL 489
Query: 221 TGIPPAPRGVPQL 259
TG+PPAPRGVPQ+
Sbjct: 490 TGLPPAPRGVPQI 502
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 516 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAG 680
K+ + DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+ AG
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKDAG 644
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 104 bits (249), Expect = 8e-23
Identities = 45/84 (53%), Positives = 66/84 (78%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A+K+ +D QK
Sbjct: 499 IEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQK 558
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
E ++++N LE+Y + MK+ + D++
Sbjct: 559 EKVESRNELEAYAYQMKTQIADKE 582
Score = 81.4 bits (192), Expect = 6e-16
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++
Sbjct: 427 GIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDV 486
Query: 221 TGIPPAPRGVPQL 259
TGIPPAPRGVPQ+
Sbjct: 487 TGIPPAPRGVPQI 499
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 516 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAG 680
K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y G
Sbjct: 587 KLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLYSAGG 641
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 102 bits (245), Expect = 2e-22
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
IEVTF+ID NGIL+VSA +K T +NK+TITND RLS E+IERM+N+A+K+ +D QK
Sbjct: 130 IEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQK 189
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
E ++++N LE+Y + +K+ + D++
Sbjct: 190 EKVESRNELEAYAYQIKTQIADKE 213
Score = 81.4 bits (192), Expect = 6e-16
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++
Sbjct: 58 GIETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDV 117
Query: 221 TGIPPAPRGVPQL 259
TGIPPAPRGVPQ+
Sbjct: 118 TGIPPAPRGVPQI 130
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 516 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAG 680
K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y G
Sbjct: 218 KLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLYSAGG 272
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/73 (53%), Positives = 45/73 (61%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L
Sbjct: 425 GIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSL 484
Query: 221 TGIPPAPRGVPQL 259
GIPPAPRGVPQ+
Sbjct: 485 VGIPPAPRGVPQV 497
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +1
Query: 256 IEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 435
+EVTFDIDANGI+NVSA ++ T KE +I I G LSK++IE M+ EAEK ED K+K
Sbjct: 497 VEVTFDIDANGIVNVSARDRGTGKEQQIVI-QSSGGLSKDQIENMIKEAEKNAAEDAKRK 555
Query: 436 ETIQAKNALESYCFSMKSTMED 501
E ++ N E ++ M +
Sbjct: 556 ELVEVINQAEGIIHDTEAKMTE 577
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
GIET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L
Sbjct: 425 GIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSL 484
Query: 221 TGI 229
GI
Sbjct: 485 VGI 487
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 307 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 468
+++ K KIT +D + K +I+ +V EAEK + E DK+KE K A ES
Sbjct: 860 VDRFMKKMKKITTLDDLAKDGKIDIDTIVEEAEKKKAEQDKKKEKKSTKKANES 913
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSKEE-IERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 486
EK K+ +K R+ KEE I++ V EAEK + E+ +++ KN E + +
Sbjct: 251 EKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSINPE 310
Query: 487 STMEDEK 507
+ D+K
Sbjct: 311 MSRNDKK 317
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
G++ M+ LIK+ D Q + + V+EGER + N LG+ L
Sbjct: 398 GVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISL 457
Query: 221 TGIPPAPRG 247
I P RG
Sbjct: 458 P-IQPKRRG 465
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 41 GIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 220
G++ M+ LIK+ D Q + + V+EGER + N LG+ L
Sbjct: 398 GVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISL 457
Query: 221 TGIPPAPRG 247
I P RG
Sbjct: 458 P-IQPKRRG 465
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 435
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1657 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1716
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ + + ALES S K+ + ++
Sbjct: 1717 DAEEERRALESRLQSAKTLLRSQE 1740
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 435
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ + + ALES S K+ + ++
Sbjct: 1790 DAEEERRALESRLQSAKTLLRSQE 1813
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 FDI-DANGILN--VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 435
FDI + G L ++ IEK + N++ T + + E +N+ E +YRN +D +
Sbjct: 1730 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQ 1789
Query: 436 ETIQAKNALESYCFSMKSTMEDEK 507
+ + + ALES S K+ + ++
Sbjct: 1790 DAEEERRALESRLQSAKTLLRSQE 1813
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +1
Query: 364 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS--MKSTME--DEKPRK 516
L +E+ + +K+RN+DDK+ + ++ N LE S M+ST E DE+ R+
Sbjct: 450 LEEEQDDSEKEVCKKHRNKDDKRVDDVEDSNDLEENASSAPMRSTSECGDERERR 504
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 486
E+ +K++K T DK + K +E + + + R EDDK++E + E +K
Sbjct: 94 EEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKKKDEVK 153
Query: 487 STMEDEK 507
EDEK
Sbjct: 154 DKKEDEK 160
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 355 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQ-----AKNALESYCFSMKSTMEDEKPRK 516
KG KEE ++ + E+ + DD++K+T + +K E S+K T E + RK
Sbjct: 65 KGEEKKEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERK 123
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 376 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 504
++++ N + + D ++K AKN+LE Y + M+ + D+
Sbjct: 552 DVQKFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKVSDQ 594
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 352 DKGRLSKEEIERMVNEAEKYRNEDDKQ--KETIQAKNALESYCFSMKSTMEDEKPRK 516
++ + KEE ER+ EK + E +KQ K+ I+AK E + ++EK RK
Sbjct: 957 EQRKAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEER--MKKEQEKQEEKERK 1011
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +1
Query: 298 VSAIEKSTNKENKITITNDKGRLSKEEIER----MVNEAEKYRNEDDKQKETIQA-KNAL 462
V++ K+ EN ITN +++ R N+ Y D +ET+ K AL
Sbjct: 368 VASSIKNALDENDFGITNLASNTQMQQMGRTTYQQTNQTPTYGISDFSNEETVNRYKEAL 427
Query: 463 ESYCFSMKSTMEDEKP 510
+ Y MKS KP
Sbjct: 428 KDYTVFMKSMASQNKP 443
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 352 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 453
D+ L +EEIER+ E ++ +NE K + +QA+
Sbjct: 23 DESFLDEEEIERIKEELQRVQNEKKKHIQRMQAR 56
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 220 DRDPTGAAWRASIEVTFDIDANGILNVSAIEKSTNKENKITITND 354
D +PTG++W IE T + + + I+ S E K+T + D
Sbjct: 83 DSNPTGSSWFQEIEAT--VGGQTVKSEHNIDSSVEVEKKVTTSTD 125
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 VVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCY 23
+VI GH Y G V+R GG +SLFS L+ GH +SS L E G
Sbjct: 208 LVIRGHQLFKEMYPQ---GCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQR 259
Query: 22 IKQQQIL 2
+K +Q+L
Sbjct: 260 VKVKQVL 266
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR----NEDDKQKETIQAKNALESYCF 477
E N E +T + R KEE++ + E+Y+ NE D +KE + N L + C
Sbjct: 38 EMCQNYEVNLTALQENERKLKEEVKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCL 97
Query: 478 S 480
+
Sbjct: 98 N 98
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 725 LRVLRPGSPAYSGDSSGTLVHLRNYRIV 642
+ ++R P+YSGDS GT+++ R Y +V
Sbjct: 345 VEIVRLFDPSYSGDSDGTIIY-RAYNLV 371
>Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical
protein T10G3.1 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 271 DIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY----RNEDDKQKE 438
DID + + A E + N+E + +K +LS E IE++ E Y R +++QKE
Sbjct: 191 DIDEDDLPPPPATEDTENEEPEEECLANKEKLSDEVIEKLQAETTMYYRLVRQRNEQQKE 250
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 453
EK +E K ++K KE+ + N+ +K +++DDK++E+ + K
Sbjct: 77 EKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 310 EKSTNKENKITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 486
EKS E K + + K KEE E E ++ + EDDK+ E K + +
Sbjct: 73 EKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSE 132
Query: 487 STMEDEKPR 513
EDEK +
Sbjct: 133 DKKEDEKEK 141
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 373 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 504
+E +R + E + R +KQ E +Q + ++ + FS++ +DE
Sbjct: 45 DEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQKEFQDE 88
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 322 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 501
N+E+K K KEE+E+ E ++ ++E+ K++E + + E + +D
Sbjct: 284 NEEDKKEEEPKKEEEKKEEVEK--KEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKD 341
Query: 502 EKPRK 516
E+P+K
Sbjct: 342 EEPKK 346
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +1
Query: 298 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 477
+ +++ ++++ +K + +EE+ R + E + E+DK + K LES
Sbjct: 985 IRSLQDEIQSQDEVISKLNKEKKHQEEVNRKL--LEDIQAEEDKVNHLNKTKAKLESTLD 1042
Query: 478 SMKSTMEDEK 507
++ T+E EK
Sbjct: 1043 ELEDTLEREK 1052
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMK 486
E+ +K++K T DK + K +E + + + + ED+K++E+ + E +K
Sbjct: 88 EEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEEKKKDEVK 147
Query: 487 STMEDEK 507
EDEK
Sbjct: 148 DKKEDEK 154
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 310 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK-ETIQAKNALESYCFSMK 486
EK T ++ + + D+G LSKEEI ++ +K + D+++ +T + + E+ +
Sbjct: 135 EKETMEKKQKSKDEDEGDLSKEEILKIKKALKKEKKLRDRERLKTEKIDKSTETKNSTTP 194
Query: 487 STMEDEKPRK 516
ST +++ K
Sbjct: 195 STEKEKSSMK 204
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 289 ILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK---QKETIQAKNA 459
+++ +A+E + D+ +K E+E + EAEK ++E ++ +E + A N
Sbjct: 143 LMDEAALEGEKGNVDAAQTAVDRADKAKVEVEELTQEAEKLKSEKERAINMEENVTAGNR 202
Query: 460 LESYC 474
C
Sbjct: 203 QMQVC 207
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 340 TITNDKGRLSKEEIERMVNEAEKYR 414
T N G LSKEE++ M++E+ K R
Sbjct: 70 TCVNGLGCLSKEEVQMMIDESNKPR 94
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 343 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 468
+ + G LSKEE + + + +NE+ + +E I+ KNA S
Sbjct: 1 MATESGGLSKEEFLLVQEQLLQLKNENYELREEIKKKNAAAS 42
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 429
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 284 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 324
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 EKISDSDK-QTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 632
+K+S++++ Q +D D IKW+D + E+Y E+
Sbjct: 176 KKLSENERFQKFVDNAEDLIKWMDDKEKEICEKYSKMDFEV 216
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 429
++ TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 340 LKDGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 380
>AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division
cycle related protein25.1 protein.
Length = 604
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 320 VDFSIAETLRIPLASMSKVTSIEARHAAPVGSRSARIY 207
VDFS E+ R+ L S SI R+++ SRS+ Y
Sbjct: 65 VDFSKLESGRVALTDCSNFVSILQRNSSVSSSRSSSFY 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,042,847
Number of Sequences: 27780
Number of extensions: 332183
Number of successful extensions: 1545
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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