Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30818
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   7.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   7.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +2

Query: 5   GRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGL 133
           G++  +Q    +  + +    M+E RD   +  P  +  KHGL
Sbjct: 73  GQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGL 115


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 72  WNIETLMVRKY 104
           WN+ T M  KY
Sbjct: 47  WNVPTFMCHKY 57


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 199 LLFFYLFINHVRI 237
           +LF+YL   HVR+
Sbjct: 781 ILFWYLCAGHVRL 793


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 199 LLFFYLFINHVRI 237
           +LF+YL   HVR+
Sbjct: 819 ILFWYLCAGHVRL 831


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 147 NFSSSRPCLKNIMIGI 100
           ++ S RP L++I+IGI
Sbjct: 134 HYYSDRPGLEHIVIGI 149



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 208 FYLFINHVRILAGTGFLITRL 270
           F+L  N   I+  TG  ITR+
Sbjct: 217 FHLMFNRDLIIVQTGCTITRV 237


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 27  SLLGSPWIVMAWLP*WNIE 83
           SLLG P +++   P W  +
Sbjct: 538 SLLGGPLVMVCSAPVWRFQ 556


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/42 (16%), Positives = 20/42 (47%)
 Frame = +3

Query: 159 IRNNSIIPNWRLDTFVFLFIYQSCPHPGRNWLSHHKAEQFCI 284
           + N+ ++   + ++   + + Q+CP P   W +   +E   +
Sbjct: 241 LENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLV 282


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/42 (16%), Positives = 20/42 (47%)
 Frame = +3

Query: 159 IRNNSIIPNWRLDTFVFLFIYQSCPHPGRNWLSHHKAEQFCI 284
           + N+ ++   + ++   + + Q+CP P   W +   +E   +
Sbjct: 241 LENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLV 282


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 147 NFSSSRPCLKNIMIGI 100
           ++ S RP L++I+IGI
Sbjct: 134 HYYSDRPGLEHIVIGI 149



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 208 FYLFINHVRILAGTGFLITRL 270
           F+L  N   I+  TG  ITR+
Sbjct: 217 FHLMFNRDLIIVQTGCTITRV 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,174
Number of Sequences: 438
Number of extensions: 1948
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)