Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30817
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 33 0.21
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical pr... 30 1.5
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 29 2.0
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 29 2.6
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 29 2.6
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 29 2.6
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 29 2.6
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 29 2.6
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 3.4
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 28 4.5
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 28 4.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 28 6.0
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 28 6.0
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical pr... 28 6.0
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 STSAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCK---LTDKSMELHVD 171
S P K+ +K + D K K V+ K+ ++ +EQ+Y K D+ ++ +
Sbjct: 7 SEDVPENKQKSLKFEII--DARMKIFKDIVKSKSSESVKEEQIYQKSLEFFDEDLKSSEE 64
Query: 172 NLENKDYLLVINKLLEPINVAD 237
++ N++ K LEP+NV D
Sbjct: 65 SVSNEEIKTGSEKELEPLNVFD 86
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKT 497
E+EKK ED++ + E +KK+ + K E D+E K+ K + ++ KK
Sbjct: 302 EVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEK---KEEEEKKE 358
Query: 498 DIMDYK 515
D ++ K
Sbjct: 359 DEVEEK 364
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKT 497
E EKK E+Q+ K E +KKD + K E +DE++ K + + KK
Sbjct: 319 EEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEEKELEPKKD 378
Query: 498 D 500
+
Sbjct: 379 E 379
>Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical
protein DH11.2 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 16 VQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELH 165
V K +L YGWDQ + FV TL + YC L D EL+
Sbjct: 34 VSKVLPTELVAYGWDQVSRSFGTFVH----RTLCSKVYYCALHDPVWELY 79
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKK----DPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQ 485
E+ D R N LK + K DP+ + ++ N YE GD + + K
Sbjct: 15 EVGISITDARGNSLKAQQIAGKERNLDPEADDLEVVVNFYEAGDGTFQLQLPKLTAVKPV 74
Query: 486 RKKTDIMDY 512
K D++D+
Sbjct: 75 DKVNDVLDF 83
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 336 EDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKTDI 503
+D + N K + KK ++ K + E G DE + K W ++ +KT +
Sbjct: 1205 DDDKENGAKRQKNTKKVHTTEVVLEKKTLVEHGFDEWMGFLKKKWRVQRKERKTQL 1260
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 NPNTTWSHMTEIEKKFEDQRNNRLKPAETD--KKDPQDSIMSLMKNMYETGDDEMKRMIS 461
N T +++ + K E RNNRL D KK +D+I + + + ++E + +
Sbjct: 779 NQETLEKKLSDWQAKLEAVRNNRLAERAEDRKKKRKEDAIQAKIAEERKKREEEERARLQ 838
Query: 462 KAWYEGQQRKKTD 500
EGQ+R+ D
Sbjct: 839 V--IEGQRRQHND 849
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 MTEIEKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQ 485
+ E+EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q
Sbjct: 168 VNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQ 227
Query: 486 R 488
+
Sbjct: 228 K 228
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 MTEIEKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQ 485
+ E+EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q
Sbjct: 168 VNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQ 227
Query: 486 R 488
+
Sbjct: 228 K 228
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 MTEIEKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQ 485
+ E+EKK E + N+RL AE +K Q+ I+ + E+ + +++R + A +Q
Sbjct: 168 VNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQ 227
Query: 486 R 488
+
Sbjct: 228 K 228
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +3
Query: 237 QSLETKTDKVVIFLAKSNPNTTWSHMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMK 416
+ L TK D F+ N+TWSH + +K + KP + K ++ M +K
Sbjct: 321 ERLSTK-DTGKSFVRPERFNSTWSHWSRAAQKKPIYLDGYEKPILRELKTISNNGMFHLK 379
Query: 417 NMYET 431
NMY T
Sbjct: 380 NMYLT 384
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +3
Query: 339 DQRNNRLKPAETDKK----DPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQQRKKTDIM 506
D R N LK + K DP+ + ++ N YE GD + + K K D++
Sbjct: 22 DARGNSLKAQQIAGKERNLDPEADDLEVVVNFYEAGDGTFQLQLPKLTAVKPVDKVNDVL 81
Query: 507 DY 512
D+
Sbjct: 82 DF 83
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = -3
Query: 457 IILFISSSPVSYIFFMRLIMESCGSFLSVS---AGFKRL-----LRWSSNFFSISV 314
IILFI SS +S F+ +I +F+ S +GF + L +SSNFFS+++
Sbjct: 82 IILFIHSSIISLRVFVYIISSLASAFIIDSRTLSGFYFIQPSLYLDYSSNFFSVAI 137
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 31 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 204
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 205 NKLLE 219
+ ++
Sbjct: 480 CETMQ 484
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 31 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 204
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 205 NKLLE 219
+ ++
Sbjct: 480 CETMQ 484
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 491
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 492 KTDI 503
+I
Sbjct: 530 SRNI 533
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 491
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 492 KTDI 503
+I
Sbjct: 530 SRNI 533
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 318 EIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNM--YETGDDEMKRMISKAWYEGQQRK 491
EIEK+ E ++ L+P + DSI S M+ M + +D M K Y + +
Sbjct: 470 EIEKENEIRKRTTLQPQQRQPSSRHDSINSAMEEMSLQQFLEDTMGEEFGKTQYSESRAE 529
Query: 492 KTDI 503
+I
Sbjct: 530 SRNI 533
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 445 ISSSPVSYIFFMRLIMESCGSFLSVSAGFKRL-----LRWSSNFFSISVI*DHVVFGLDF 281
+ S P + +F+M L M SFL+V + FK + L+ SS FF V D + + F
Sbjct: 197 LRSVPDTNLFYMSLAMFGIDSFLAVLSTFKAIIFLLELKNSSEFFERLV--DWIDLLVPF 254
Query: 280 ARNMTTLS 257
A + TL+
Sbjct: 255 ASDALTLT 262
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 181 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 56
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 181 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 56
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical
protein F34H10.4 protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 458 DHSLHFIITSFIHILHETHYGILWIFLVSFGRFQAVITLVFKFFFNFSHMRPCCVWIRFC 279
D + + S + L HY ++ ++S FQ V +VF F+ S+ C + F
Sbjct: 331 DFESYLKVRSVVQYLVSKHYILM---ILSSLNFQYVTPIVFYNIFSVSNSIQLCSSVFFL 387
Query: 278 KEYDY 264
K Y Y
Sbjct: 388 KVYSY 392
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 354 RLKPAETDKKDPQDSIMSLMKNMYETGDDEMKR 452
+LK AE DKK MSL+K + ++ +E KR
Sbjct: 371 KLKSAEEDKKLAVKKAMSLVKELQKSLKEERKR 403
>AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical
protein Y62H9A.2 protein.
Length = 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 309 HMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYET 431
H T+I + +++ LK ETD D Q S M ET
Sbjct: 155 HKTKILENMLEEKEKELKTRETDAHDLQKSFQFSFTEMAET 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,173,306
Number of Sequences: 27780
Number of extensions: 283162
Number of successful extensions: 1075
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -