Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30817
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   4.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   5.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 447 KRMISKAWYEGQQRKKTDI 503
           K+++   WY+ Q R+ TD+
Sbjct: 292 KKVLPYYWYKYQDRRDTDL 310


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 442 SSSPVSYIFFMRLIMESCGSFLSVS 368
           S  PVSY+  + + M SC  F+ +S
Sbjct: 266 SLPPVSYVKAIDVWMSSCSVFVFLS 290


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 196 ASNLYFPDCPHAAPLIYLSIYNI 128
           A  LY+P  P  +  I + ++NI
Sbjct: 267 ALQLYYPHVPEYSSSIIMELHNI 289


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 196 ASNLYFPDCPHAAPLIYLSIYNI 128
           A  LY+P  P  +  I + ++NI
Sbjct: 282 ALQLYYPHVPEYSSSIIMELHNI 304


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 127 PVPLVVYEHSLVQQIP*QIYPTGPNHI 47
           P+   +Y  +L+Q  P   YP+  +HI
Sbjct: 423 PMEYRLYNPALIQSQPSPQYPSTSSHI 449


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 246 PMTVCHIYRFQ*LVNNKQVI 187
           PMT C ++ F  + N   +I
Sbjct: 208 PMTFCRVFPFHLMFNRDLII 227


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 246 PMTVCHIYRFQ*LVNNKQVI 187
           PMT C ++ F  + N   +I
Sbjct: 208 PMTFCRVFPFHLMFNRDLII 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,917
Number of Sequences: 438
Number of extensions: 3640
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)