Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30814
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical pr...    31   0.96 
L36965-1|AAC37216.1|  192|Caenorhabditis elegans guanine nucleot...    31   0.96 
AL132952-3|CAB63379.1|  192|Caenorhabditis elegans Hypothetical ...    31   0.96 
AF024503-14|AAG24088.2|  292|Caenorhabditis elegans Serpentine r...    29   5.1  
AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical ...    28   6.8  

>Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical
           protein K09E4.2 protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 236 FVWLHFLIGTCIFYSLSINLSINALTICQGRLWTPCLHGSIKIFLCYI 379
           F+   +L+G C+FYSL++++ +N L       +T  L+ S    L Y+
Sbjct: 168 FLEQKWLVG-CVFYSLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYL 214


>L36965-1|AAC37216.1|  192|Caenorhabditis elegans guanine nucleotide
           regulatory proteinprotein.
          Length = 192

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 3   ATRAALQVKKKKKTRCSLL 59
           AT+AALQ KKKKK++C +L
Sbjct: 174 ATQAALQQKKKKKSKCMIL 192


>AL132952-3|CAB63379.1|  192|Caenorhabditis elegans Hypothetical
           protein Y51H4A.3 protein.
          Length = 192

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 3   ATRAALQVKKKKKTRCSLL 59
           AT+AALQ KKKKK++C +L
Sbjct: 174 ATQAALQQKKKKKSKCMIL 192


>AF024503-14|AAG24088.2|  292|Caenorhabditis elegans Serpentine
           receptor, class x protein21 protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 363 FFCAISCYIIE*HFFNIDI*FLDRCHLTETC--LVWYFVF*FFNKIVMYKL 509
           F C +  +I+  HFF  D  F      T  C  + WY  F   N +VM  L
Sbjct: 133 FICTLFYFILGCHFFYSDTSFTFGFRETRRCTKITWYSDFMLNNSLVMVTL 183


>AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical
           protein W10G11.17 protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 120 SYQAVCEPFINQSFPDNSTLT 58
           S+  +CEPF  Q  PD STL+
Sbjct: 116 SFSPICEPFKEQLNPDESTLS 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,554,253
Number of Sequences: 27780
Number of extensions: 358898
Number of successful extensions: 756
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)