Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30809
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 120 3e-28
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 111 9e-26
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 95 8e-21
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 1e-15
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 71 3e-13
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 70 5e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 69 8e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 68 1e-12
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 64 3e-11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 55 1e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 54 2e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 54 2e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 53 4e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 52 1e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 51 2e-07
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 51 2e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 48 1e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 41 2e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 41 2e-04
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 41 2e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 39 8e-04
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 1.1
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 1.1
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 3.3
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 4.3
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 5.7
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 7.6
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 7.6
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 120 bits (288), Expect = 3e-28
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +1
Query: 49 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 228
K+YD L KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 229 DTAGQERFR 255
DTAGQERFR
Sbjct: 64 DTAGQERFR 72
Score = 116 bits (279), Expect = 4e-27
Identities = 50/91 (54%), Positives = 74/91 (81%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 434
TITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNKCD + QRQV
Sbjct: 73 TITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQV 132
Query: 435 SKERGEQLAIEYQIKFVETSAKDSLMLNMHF 527
S E+G+ LA E +KF+E SAK ++ ++ F
Sbjct: 133 SFEQGQALADELGVKFLEASAKTNVNVDEAF 163
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 494 SKRLVNVEYAFYTLARDI-KAKMEKKQEASN 583
+K VNV+ AF+TLAR+I K K++ + E SN
Sbjct: 153 AKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 111 bits (268), Expect = 9e-26
Identities = 51/71 (71%), Positives = 60/71 (84%)
Frame = +1
Query: 43 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 222
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 223 IWDTAGQERFR 255
IWDTAGQERFR
Sbjct: 61 IWDTAGQERFR 71
Score = 85.8 bits (203), Expect = 7e-18
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 434
TIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++GNK D+ ++ V
Sbjct: 72 TITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVV 131
Query: 435 SKERGEQLAIEYQIKFVETSAKDSLMLNMHF 527
++ A I F+ETSAKDS + F
Sbjct: 132 EYSVAKEFADSLNIPFLETSAKDSTNVEQAF 162
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 95.5 bits (227), Expect = 8e-21
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +1
Query: 55 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 234
YD LFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 235 AGQERFR 255
AGQER+R
Sbjct: 67 AGQERYR 73
Score = 87.8 bits (208), Expect = 2e-18
Identities = 36/83 (43%), Positives = 58/83 (69%)
Frame = +3
Query: 258 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVS 437
IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK DL R VS
Sbjct: 75 ITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVS 134
Query: 438 KERGEQLAIEYQIKFVETSAKDS 506
E + A E + F+ETSA D+
Sbjct: 135 TEEAQAFAAENNLSFIETSAMDA 157
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 78.2 bits (184), Expect = 1e-15
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +1
Query: 67 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 246
FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 247 RFR 255
RFR
Sbjct: 72 RFR 74
Score = 72.5 bits (170), Expect = 7e-14
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 434
++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL +RQV
Sbjct: 75 SLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQV 134
Query: 435 SKERGEQLAIEYQIKFVETSAK 500
++E GE+ A E +I +ETSAK
Sbjct: 135 TQEEGEKKAKELKIMHMETSAK 156
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 70.5 bits (165), Expect = 3e-13
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = +1
Query: 64 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 243
L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ+WDTAGQ
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 244 ERFR 255
ERF+
Sbjct: 68 ERFQ 71
Score = 54.0 bits (124), Expect = 2e-08
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKCDLDS 422
++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK D++
Sbjct: 72 SLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEE 131
Query: 423 Q-RQVSKERGEQLA-IEYQIKFVETSAKDSLMLNMHF 527
Q R VSK + +I + ETSAK+++ + F
Sbjct: 132 QKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 69.7 bits (163), Expect = 5e-13
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 250 FR 255
F+
Sbjct: 70 FQ 71
Score = 45.2 bits (102), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +3
Query: 267 AYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD-SQRQV 434
A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D D S+R V
Sbjct: 76 AFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAV 135
Query: 435 SKER 446
S R
Sbjct: 136 SLHR 139
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 68.9 bits (161), Expect = 8e-13
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Frame = +1
Query: 49 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 216
++YD L K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 217 LQIWDTAGQERFR 255
LQIWDTAGQE+FR
Sbjct: 64 LQIWDTAGQEKFR 76
Score = 68.1 bits (159), Expect = 1e-12
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 434
++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++ G+K DL +QRQV
Sbjct: 77 SVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQV 136
Query: 435 SKERGEQLAIEYQIKFV-ETSA 497
S E + E I ETS+
Sbjct: 137 STEEAAEFCSEKHISSAHETSS 158
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 68.1 bits (159), Expect = 1e-12
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 246
KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 247 RFR 255
R++
Sbjct: 76 RYK 78
Score = 62.9 bits (146), Expect = 5e-11
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 TITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQ- 431
++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL +R+
Sbjct: 79 SLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRA 138
Query: 432 VSKERGEQLAIEYQIKFVETSAKDSLMLNMHFT 530
V K E A E + F ETSAK + +N FT
Sbjct: 139 VEKADAEAYAAEANLLFFETSAKTAENVNELFT 171
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 63.7 bits (148), Expect = 3e-11
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 246 EIPTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDS 422
E + Y R G +LVY++T+ SF+ I + + I D ++L NKCDL++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 423 QRQVSKERGEQLAIEYQIKFVETSAKDSLMLNM 521
+R VS+ GEQLA +VETSAK L LN+
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAK--LRLNV 158
Score = 47.2 bits (107), Expect = 3e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +1
Query: 43 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 222
M TY +KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 223 IWDTAGQERF 252
+ DTAGQE +
Sbjct: 60 VLDTAGQEEY 69
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 54.8 bits (126), Expect = 1e-08
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 250 F 252
+
Sbjct: 67 Y 67
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/61 (36%), Positives = 41/61 (67%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 250 F 252
+
Sbjct: 67 Y 67
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 54.0 bits (124), Expect = 2e-08
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 46 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 225
A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I
Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63
Query: 226 WDTAGQERF 252
WD GQ F
Sbjct: 64 WDLGGQREF 72
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 53.2 bits (122), Expect = 4e-08
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 250 FRQ 258
+ +
Sbjct: 69 YER 71
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 250 FRQ 258
+ Q
Sbjct: 74 YDQ 76
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 67 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 246
FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 247 R 249
+
Sbjct: 70 K 70
Score = 34.7 bits (76), Expect = 0.016
Identities = 20/79 (25%), Positives = 46/79 (58%)
Frame = +3
Query: 270 YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 449
Y +G GI++ +DVT+ +++N+ +W R++ ++ ++ GNK D+ +R+V K +
Sbjct: 79 YIQGQCGIIM-FDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDV-KERKV-KAKA 134
Query: 450 EQLAIEYQIKFVETSAKDS 506
+ +++ + SAK +
Sbjct: 135 ITFHRKKNLQYYDISAKSN 153
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 51.2 bits (117), Expect = 2e-07
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 246 EIPTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDS 422
E + + + G G +LVY +T++ SFE +K I + + V +++GNK DL
Sbjct: 66 EYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHM 125
Query: 423 QRQVSKERGEQLAIEYQIKFVETSAK 500
QR V+ E G+ LA E++ + E SA+
Sbjct: 126 QRAVTAEEGKALANEWKCAWTEASAR 151
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 250 F 252
+
Sbjct: 67 Y 67
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 246
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 247 RF 252
+
Sbjct: 76 EY 77
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/61 (29%), Positives = 37/61 (60%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 250 F 252
+
Sbjct: 64 Y 64
Score = 31.5 bits (68), Expect = 0.15
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Frame = +3
Query: 294 MLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL------------DSQRQV 434
++ + VT+ SFEN+K W + + V +I+G + DL Q +
Sbjct: 79 LVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDDPSVQQKLARQHQHPL 137
Query: 435 SKERGEQLAIEY-QIKFVETSA 497
+ E+GE+LA E +K+VE SA
Sbjct: 138 THEQGERLARELGAVKYVECSA 159
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 41.1 bits (92), Expect = 2e-04
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Frame = +1
Query: 34 VVKMAKTYDCLFKLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKK 210
+++ K + ++LL+G GKT+IL +ED +S T G F+IRT++++G
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG-- 59
Query: 211 VKLQIWDTAGQERFRQ*QQH----TTVVLWELCLSTMLRMRRALKTLR 342
++ IWD GQ+ R ++ T ++W + LR+ TL+
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 250 FRQ*QQH 270
R +H
Sbjct: 78 IRPLWRH 84
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 39.1 bits (87), Expect = 8e-04
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 249
++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 250 FRQ*QQH 270
R +H
Sbjct: 74 IRPLWRH 80
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 82 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 183
IGD V ++LFRF + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 246
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 247 RFRQ 258
F +
Sbjct: 63 AFME 66
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 288 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 401
GI L+ + E ++ +++ I+ENA + V +++LG
Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -2
Query: 388 FSTSALAFSSMFLIQFLMFSKLFSFVTS*TSIIPIEPR*YAVVIVGISLDQQYPIF 221
F+ L +LIQF +SF T+ T+ +E V GI D Y IF
Sbjct: 861 FTIPELGIIQKYLIQFEWLDMFYSFETTRTTDSDLERLITYGVSAGIPEDNDYMIF 916
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 551 AKMEKKQEASNPSGGRSGVHKPT 619
A + +ASNP+G S H+PT
Sbjct: 546 ASLAHLSQASNPNGSSSAPHRPT 568
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 67 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 246
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 247 R 249
+
Sbjct: 83 K 83
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 134 SSENLNSIDVFPTPESPIRSNLNKQS 57
SSE +S+DV PTP + NL S
Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNLESIS 642
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,109
Number of Sequences: 5004
Number of extensions: 71353
Number of successful extensions: 298
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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