Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30808
         (769 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p pro...   140   1e-33
AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.    140   1e-33
AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA...   140   1e-33
AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-P...    32   0.75 

>AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p
           protein.
          Length = 304

 Score =  140 bits (340), Expect = 1e-33
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = +3

Query: 3   DMAERRELTPHYLKMEREAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLM 182
           D+AER ELT HY++ME EAE+N +RRW+NAA+WKWCDLD  T DR VSRHELFPIRAPL+
Sbjct: 193 DLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDT-DRSVSRHELFPIRAPLV 251

Query: 183 ALEHCIAPFLDRCDADDDHRVTL 251
           +LEHCIAPFL+ CD++ DHR+TL
Sbjct: 252 SLEHCIAPFLESCDSNKDHRITL 274



 Score = 37.9 bits (84), Expect = 0.015
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 254 QWGKCLELDELEMEERCDDFNENAEHYL 337
           +WG CLELD  +++ERCDD      H L
Sbjct: 276 EWGACLELDPEDLKERCDDVQRAQPHLL 303


>AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.
          Length = 304

 Score =  140 bits (340), Expect = 1e-33
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = +3

Query: 3   DMAERRELTPHYLKMEREAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLM 182
           D+AER ELT HY++ME EAE+N +RRW+NAA+WKWCDLD  T DR VSRHELFPIRAPL+
Sbjct: 193 DLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDT-DRSVSRHELFPIRAPLV 251

Query: 183 ALEHCIAPFLDRCDADDDHRVTL 251
           +LEHCIAPFL+ CD++ DHR+TL
Sbjct: 252 SLEHCIAPFLESCDSNKDHRITL 274



 Score = 37.9 bits (84), Expect = 0.015
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 254 QWGKCLELDELEMEERCDDFNENAEHYL 337
           +WG CLELD  +++ERCDD      H L
Sbjct: 276 EWGACLELDPEDLKERCDDVQRAQPHLL 303


>AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA
           protein.
          Length = 304

 Score =  140 bits (340), Expect = 1e-33
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = +3

Query: 3   DMAERRELTPHYLKMEREAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLM 182
           D+AER ELT HY++ME EAE+N +RRW+NAA+WKWCDLD  T DR VSRHELFPIRAPL+
Sbjct: 193 DLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDT-DRSVSRHELFPIRAPLV 251

Query: 183 ALEHCIAPFLDRCDADDDHRVTL 251
           +LEHCIAPFL+ CD++ DHR+TL
Sbjct: 252 SLEHCIAPFLESCDSNKDHRITL 274



 Score = 37.9 bits (84), Expect = 0.015
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 254 QWGKCLELDELEMEERCDDFNENAEHYL 337
           +WG CLELD  +++ERCDD      H L
Sbjct: 276 EWGACLELDPEDLKERCDDVQRAQPHLL 303


>AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-PA
           protein.
          Length = 660

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 93  AIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRV 245
           A W +  LD   ND  +S  E++ +       E CI PF+D CD D D  +
Sbjct: 473 AKWMFGHLDLN-NDGQLSLQEMYDLEHDQN--ERCIKPFIDTCDLDTDSSI 520


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,277,163
Number of Sequences: 53049
Number of extensions: 564293
Number of successful extensions: 1466
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)