Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30808
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    77   1e-14
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    77   1e-14
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   6.4  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   DMAERRELTPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRA 173
           ++ +RREL  H L+ E    EAE++  ++     IWK+C+LD + +D+ VS HEL PI A
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220

Query: 174 PLMALEHCIAPFLDRCDADDDHRVTL 251
           P++ +E CI PFL+ CDA++D  +++
Sbjct: 221 PVIPMESCIKPFLEGCDANNDGNISI 246



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 254 QWGKCLELDELEMEERC 304
           +WGKCL L E E++ERC
Sbjct: 248 EWGKCLGLKEGEIQERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   DMAERRELTPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRA 173
           ++ +RREL  H L+ E    EAE++  ++     IWK+C+LD + +D+ VS HEL PI A
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220

Query: 174 PLMALEHCIAPFLDRCDADDDHRVTL 251
           P++ +E CI PFL+ CDA++D  +++
Sbjct: 221 PVIPMESCIKPFLEGCDANNDGNISI 246



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 254 QWGKCLELDELEMEERC 304
           +WGKCL L E E++ERC
Sbjct: 248 EWGKCLGLKEGEIQERC 264


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 272 ELDELEMEERCDDFNENAE 328
           E+++LE E RC   NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,675
Number of Sequences: 27780
Number of extensions: 295636
Number of successful extensions: 656
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)