Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30807
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    27   0.20 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    27   0.20 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    27   0.20 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    26   0.35 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    26   0.35 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   4.3  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   4.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.6  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMP 362
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMP 362
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMP 362
           KV+ +L +N P LW+S+   Y P
Sbjct: 89  KVIKFLVENKPELWDSLANKYDP 111


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMPRG 356
           KVV +L DN P +W  +   Y P G
Sbjct: 88  KVVQFLIDNKPEIWVLLEAKYDPTG 112


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMPRG 356
           KVV +L DN P +W  +   Y P G
Sbjct: 88  KVVQFLIDNKPEIWVLLEAKYDPTG 112


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 763 LVTHEKRLRMLLEGRHRPHVVH 698
           L+T  KR    LE R R H VH
Sbjct: 89  LLTKAKRFIKSLEERERKHAVH 110


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMPRG 356
           KVV YLK   P  W  ++  Y   G
Sbjct: 85  KVVNYLKTKRPKDWERLSAKYDSTG 109


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 430 KVVTYLKDNFPSLWNSINRLYMPRG 356
           KVV YLK   P  W  ++  Y   G
Sbjct: 85  KVVNYLKTKRPKDWERLSAKYDSTG 109


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 204 RVKVIPNYASYNSRRCQIVADWAARFVLQRITQFAPGPGRHF 329
           R  V P Y S  S+ C   A  A + VL  +      PG  F
Sbjct: 614 RTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPGTRF 655


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 204 RVKVIPNYASYNSRRCQIVADWAARFVLQRITQFAPGPGRHF 329
           R  V P Y S  S+ C   A  A + VL  +      PG  F
Sbjct: 704 RTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPGTRF 745


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 371 VHAEGRPTGGQAQHEVSSRTRSELRDPLENESGGPVGNDLASSRII 234
           V+  G     Q    V SR    L  PL+ E G P G     + I+
Sbjct: 366 VYRPGENPVTQRLPAVLSRIGIILASPLKREGGPPTGATTGPNEIV 411


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 470  VTVRTDTHILVHVESGH 420
            VT  T + IL+H +SGH
Sbjct: 1412 VTSSTSSSILLHWKSGH 1428


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 470  VTVRTDTHILVHVESGH 420
            VT  T + IL+H +SGH
Sbjct: 1408 VTSSTSSSILLHWKSGH 1424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,372
Number of Sequences: 438
Number of extensions: 5293
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)