Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30800
         (322 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-13|CAA84729.1|  234|Caenorhabditis elegans Hypothetical p...    35   0.015
Z83239-4|CAB05808.1|  336|Caenorhabditis elegans Hypothetical pr...    31   0.24 
U80028-9|AAN73867.1|  372|Caenorhabditis elegans Serpentine rece...    30   0.43 
AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine re...    29   0.75 
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...    29   0.99 
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p...    28   1.7  
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p...    28   1.7  
AF024499-1|AAT48620.1|  941|Caenorhabditis elegans Hypothetical ...    28   1.7  
AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine r...    28   1.7  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    27   4.0  
U80028-8|AAN73866.1|  378|Caenorhabditis elegans Serpentine rece...    27   4.0  
U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine rece...    26   5.3  
Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z66521-15|CAM33508.2|  262|Caenorhabditis elegans Hypothetical p...    26   7.0  
AC025715-4|AAP13754.1|  301|Caenorhabditis elegans Hypothetical ...    26   7.0  
Z75544-3|CAA99879.1|  212|Caenorhabditis elegans Hypothetical pr...    25   9.2  
AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine re...    25   9.2  
AF025452-8|AAB70940.1|  324|Caenorhabditis elegans Serpentine re...    25   9.2  
AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine r...    25   9.2  

>Z35663-13|CAA84729.1|  234|Caenorhabditis elegans Hypothetical
           protein T04A8.10 protein.
          Length = 234

 Score = 34.7 bits (76), Expect = 0.015
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +1

Query: 16  VWQVHLNSKQHRENIENAKKLKELTXNFTVVNKVKHKSSSPPKDAPPEKKIKGI 177
           +W  H+N K+HR++IE   KLK      T   K   +SS+   D PP KK K +
Sbjct: 29  IWTAHVNGKKHRDSIE---KLK------TSAQKRGKESSTRNTDEPPNKKQKEV 73


>Z83239-4|CAB05808.1|  336|Caenorhabditis elegans Hypothetical
           protein T09F5.8 protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 0.24
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 186 IF*YSFYLFFGRCIFWRTGTLVFNFVDYS 100
           IF   FY+ F    +WR G +VF  ++YS
Sbjct: 112 IFENRFYILFAEYTWWRYGRIVFYIINYS 140


>U80028-9|AAN73867.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein117 protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 0.43
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 247 EILPHLGHHFWVLLSLARCLHFLIFLL 167
           +IL H+G  F +L++L  C HF I LL
Sbjct: 306 QILAHVGFIFSMLITLNTCTHFFICLL 332


>AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine
           receptor, class h protein83 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 0.75
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 243 FYHTWDIIFGFCYHWHGAYIF*YSFYLFFGRCIFWRT 133
           F  TW  +    Y +H   IF   FY+F G CI ++T
Sbjct: 21  FLCTWQEV---AYTFHSITIFSLPFYIFGGYCILYKT 54


>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defective
            protein 45 protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 124  KSSSPPKDAPPEKKIKGILKNVGTVPVITKPKNDVPSVVEFHNE 255
            + + PP+  P  K   G     G  PV++ PK D PSV E  +E
Sbjct: 952  RRNDPPR--PASKADTGDKWERGVKPVVSPPKTDAPSVSEPKSE 993


>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
            protein R06F6.8a protein.
          Length = 1468

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 106  VNKVKHKSSSPPKDAPPEKKIKGILKN 186
            +NKV+H  S+  KDAP +  I G  K+
Sbjct: 1016 LNKVRHSQSTEQKDAPRKDSIGGSSKD 1042


>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
            protein R06F6.8b protein.
          Length = 1470

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 106  VNKVKHKSSSPPKDAPPEKKIKGILKN 186
            +NKV+H  S+  KDAP +  I G  K+
Sbjct: 1018 LNKVRHSQSTEQKDAPRKDSIGGSSKD 1044


>AF024499-1|AAT48620.1|  941|Caenorhabditis elegans Hypothetical
           protein F42G2.4a protein.
          Length = 941

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 22  QVHLNSKQHRENIENAKKLKELTXNFTVV 108
           Q+ L++K +  N+E+ K  KELT N TVV
Sbjct: 794 QIELDNKINLCNMEHWKNAKELTINNTVV 822


>AF022981-10|AAG24203.1|  360|Caenorhabditis elegans Serpentine
           receptor, class h protein82 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 246 KFYHTWDIIFGFCYHWHGAYIF*YSFYLFFGRCIFWRT 133
           +F  +W    G  Y +H   +F   FY+F G CI +++
Sbjct: 20  RFMCSWQ---GVAYTFHSITVFSIPFYIFGGYCILFKS 54


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 100 TVVNKVKHKSSSPPKDAPPEKKIKGILKNVGTVPVITKPKNDVPSVV 240
           T V   +   + PP+ APP  ++   L      P    P+ +VP  V
Sbjct: 613 TEVPMTEPPKTEPPRTAPPRTEVSMTLPPETVPPNTEAPRTEVPMTV 659


>U80028-8|AAN73866.1|  378|Caenorhabditis elegans Serpentine
           receptor, class w protein118 protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 244 ILPHLGHHFWVLLSLARCLHFLIFLL 167
           I+ + GH F +L++L  C H ++ LL
Sbjct: 305 IVAYFGHIFSMLITLNTCTHMIVCLL 330


>U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein18 protein.
          Length = 337

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 247 EILPHLGHHFWVLLSLARCLHFLIFLLSFFREVHLL 140
           E+L  +GH FW L S   C+ +L    S  +EV  L
Sbjct: 286 ELLIVIGHFFWQLSSGTVCIIYLTLNKSIRQEVRNL 321


>Z98851-3|CAB11538.2|  659|Caenorhabditis elegans Hypothetical
           protein H12I19.4 protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 304 LTFSVXTTGLSGXLLISHCEILPHLGHHFWVLLSLARCLHFLIFLLSFFREVHLLEDWNS 125
           +TF   TT  S    I    I+  + HHF+    L      +I LL+F   V+    W++
Sbjct: 307 ITFFKSTTVTSNIFCIVLTFIITIIVHHFFEKQYLKFDFKSIILLLTFLLAVNAFVQWST 366


>Z66521-15|CAM33508.2|  262|Caenorhabditis elegans Hypothetical
           protein W02B12.13 protein.
          Length = 262

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = +1

Query: 145 DAPPEKKIKGILKNVGTVPV-----ITKPKNDVPSV 237
           D PP+ +  G+LK++G++ V     +  P ND  SV
Sbjct: 129 DLPPDSRHNGLLKDIGSIGVGFGVGVGVPGNDPVSV 164


>AC025715-4|AAP13754.1|  301|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.13 protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  ENIENAKKLKELTXNFTVVNKVKHKSSSPPK 144
           EN++N KK       FT+ +KV  K+   PK
Sbjct: 241 ENLQNRKKNGIFVLKFTLKSKVAEKTRFTPK 271


>Z75544-3|CAA99879.1|  212|Caenorhabditis elegans Hypothetical
           protein K02A11.2 protein.
          Length = 212

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 19  WQVHLNSKQHRENIENAKKLKELTXNFTVVNKVKHKS 129
           ++V +N++Q REN +NA +  ++   F    + K KS
Sbjct: 174 FEVRVNTRQARENKQNADRETKIDAVFNKYARGKKKS 210


>AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 61 protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 247 EILPHLGHHFW-VLLSLARCLHFLIFLLSFFR 155
           E L  +   +W +  S+  CLH  +FLL ++R
Sbjct: 2   EPLQTISRVYWTIFFSICLCLHSSMFLLIYYR 33


>AF025452-8|AAB70940.1|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein31 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 247 EILPHLGHHFWVLLSLARCLHFLIFLLSFF 158
           E+  HL +H+++  ++A CL+ L+  L  F
Sbjct: 8   EVPWHLIYHYYISGTIAICLNLLVIYLILF 37


>AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 75 protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 247 EILPHLGHHFW-VLLSLARCLHFLIFLLSFFR 155
           E L  +   +W +  S+  CLH  +FLL ++R
Sbjct: 2   EPLQTISRVYWTIFFSICLCLHSSMFLLIYYR 33


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.310    0.128    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,222,916
Number of Sequences: 27780
Number of extensions: 117543
Number of successful extensions: 398
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)