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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30797
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004884-1|AAO45240.1|  368|Drosophila melanogaster GH09623p pro...   152   5e-37
AE014297-4026|AAF56642.2|  368|Drosophila melanogaster CG6330-PA...   152   5e-37
AE014297-4025|AAN14095.1|  347|Drosophila melanogaster CG6330-PB...   152   5e-37
AY075301-1|AAL68168.1|  378|Drosophila melanogaster AT31332p pro...   122   6e-28
AE013599-3512|AAF46930.2|  378|Drosophila melanogaster CG3788-PA...   122   6e-28
AY119237-1|AAM51097.1|  300|Drosophila melanogaster SD19372p pro...    75   9e-14
AE014134-535|AAF51164.2|  300|Drosophila melanogaster CG17224-PB...    75   1e-13
AE014134-534|AAF51165.2|  300|Drosophila melanogaster CG17224-PA...    75   1e-13
AY121689-1|AAM52016.1|  518|Drosophila melanogaster RE49550p pro...    30   4.2  
AY094947-1|AAM11300.1|  233|Drosophila melanogaster RH63449p pro...    30   4.2  
AE014134-1611|AAF52752.1|  233|Drosophila melanogaster CG13108-P...    30   4.2  
AE013599-2450|AAF57878.2|  518|Drosophila melanogaster CG6568-PA...    30   4.2  
X81321-1|CAA57101.1|  512|Drosophila melanogaster male specific ...    29   5.5  
BT001896-1|AAN71685.1| 1285|Drosophila melanogaster SD19050p pro...    29   5.5  
AY058498-1|AAL13727.1|  558|Drosophila melanogaster LD03886p pro...    29   5.5  
AE014296-1091|AAF50680.1| 1270|Drosophila melanogaster CG7376-PA...    29   5.5  

>BT004884-1|AAO45240.1|  368|Drosophila melanogaster GH09623p
           protein.
          Length = 368

 Score =  152 bits (369), Expect = 5e-37
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = +3

Query: 258 EMFGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSI 437
           EMFGDVKFVCMGGTPKRME FA+ IM EIG+KLP GT LQDIS +SYRYSMYKVGPVL +
Sbjct: 75  EMFGDVKFVCMGGTPKRMENFAHFIMNEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCV 134

Query: 438 SHGMGIPSVGILLHEVIKLMYHAK 509
           SHGMG PSV IL+HE+IKLMYHAK
Sbjct: 135 SHGMGTPSVSILMHEMIKLMYHAK 158



 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPVF R                +++A+DG LRN  E T+LGK + RPAKLD++L RELK
Sbjct: 160 KDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELK 219

Query: 692 ALADPEDPYDTVTGKTMCTYDFYE 763
           +LA P+DPYDT+ GKT+CT DFYE
Sbjct: 220 SLASPDDPYDTIIGKTLCTNDFYE 243



 Score = 66.1 bits (154), Expect = 5e-11
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 154 RYPDGTVRLRNPNIELMDQDILYHLALGSGSHDL 255
           RY DGTV+LRN NIELMDQDILYHLALGS SHDL
Sbjct: 40  RYSDGTVKLRNSNIELMDQDILYHLALGSESHDL 73


>AE014297-4026|AAF56642.2|  368|Drosophila melanogaster CG6330-PA,
           isoform A protein.
          Length = 368

 Score =  152 bits (369), Expect = 5e-37
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = +3

Query: 258 EMFGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSI 437
           EMFGDVKFVCMGGTPKRME FA+ IM EIG+KLP GT LQDIS +SYRYSMYKVGPVL +
Sbjct: 75  EMFGDVKFVCMGGTPKRMENFAHFIMNEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCV 134

Query: 438 SHGMGIPSVGILLHEVIKLMYHAK 509
           SHGMG PSV IL+HE+IKLMYHAK
Sbjct: 135 SHGMGTPSVSILMHEMIKLMYHAK 158



 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPVF R                +++A+DG LRN  E T+LGK + RPAKLD++L RELK
Sbjct: 160 KDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELK 219

Query: 692 ALADPEDPYDTVTGKTMCTYDFYE 763
           +LA P+DPYDT+ GKT+CT DFYE
Sbjct: 220 SLASPDDPYDTIIGKTLCTNDFYE 243



 Score = 66.1 bits (154), Expect = 5e-11
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 154 RYPDGTVRLRNPNIELMDQDILYHLALGSGSHDL 255
           RY DGTV+LRN NIELMDQDILYHLALGS SHDL
Sbjct: 40  RYSDGTVKLRNSNIELMDQDILYHLALGSESHDL 73


>AE014297-4025|AAN14095.1|  347|Drosophila melanogaster CG6330-PB,
           isoform B protein.
          Length = 347

 Score =  152 bits (369), Expect = 5e-37
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = +3

Query: 258 EMFGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSI 437
           EMFGDVKFVCMGGTPKRME FA+ IM EIG+KLP GT LQDIS +SYRYSMYKVGPVL +
Sbjct: 54  EMFGDVKFVCMGGTPKRMENFAHFIMNEIGYKLPAGTQLQDISAYSYRYSMYKVGPVLCV 113

Query: 438 SHGMGIPSVGILLHEVIKLMYHAK 509
           SHGMG PSV IL+HE+IKLMYHAK
Sbjct: 114 SHGMGTPSVSILMHEMIKLMYHAK 137



 Score =   99 bits (238), Expect = 3e-21
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPVF R                +++A+DG LRN  E T+LGK + RPAKLD++L RELK
Sbjct: 139 KDPVFIRIGTCGGIGVDGGTVIITEDALDGQLRNSHEFTILGKTIHRPAKLDKKLARELK 198

Query: 692 ALADPEDPYDTVTGKTMCTYDFYE 763
           +LA P+DPYDT+ GKT+CT DFYE
Sbjct: 199 SLASPDDPYDTIIGKTLCTNDFYE 222



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 157 YPDGTVRLRNPNIELMDQDILYHLALGSGSHDL 255
           Y DGTV+LRN NIELMDQDILYHLALGS SHDL
Sbjct: 20  YSDGTVKLRNSNIELMDQDILYHLALGSESHDL 52


>AY075301-1|AAL68168.1|  378|Drosophila melanogaster AT31332p
           protein.
          Length = 378

 Score =  122 bits (294), Expect = 6e-28
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = +3

Query: 258 EMFGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSI 437
           ++FGDV+FVCMGGTP RME FAY +M EIG K+   T L++IS    R+S++KVGPVL  
Sbjct: 82  KVFGDVRFVCMGGTPGRMENFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCA 141

Query: 438 SHGMGIPSVGILLHEVIKLMYHAK 509
           SHGMG PS+ ILLHE+IK+MYHAK
Sbjct: 142 SHGMGCPSISILLHELIKMMYHAK 165



 Score = 65.3 bits (152), Expect = 9e-11
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPVF R                S EA+DG L  V E+ V G  VQ  ++LD  L  E+K
Sbjct: 167 KDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNPVHEILVHGVSVQHASQLDESLADEIK 226

Query: 692 ALADP-EDPYDTVTGKTMCTYDFYE 763
              DP +D Y+ V G+T+C +DFYE
Sbjct: 227 MCHDPCKDKYEAVIGRTLCAHDFYE 251


>AE013599-3512|AAF46930.2|  378|Drosophila melanogaster CG3788-PA
           protein.
          Length = 378

 Score =  122 bits (294), Expect = 6e-28
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = +3

Query: 258 EMFGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSI 437
           ++FGDV+FVCMGGTP RME FAY +M EIG K+   T L++IS    R+S++KVGPVL  
Sbjct: 82  KVFGDVRFVCMGGTPGRMENFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCA 141

Query: 438 SHGMGIPSVGILLHEVIKLMYHAK 509
           SHGMG PS+ ILLHE+IK+MYHAK
Sbjct: 142 SHGMGCPSISILLHELIKMMYHAK 165



 Score = 65.3 bits (152), Expect = 9e-11
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPVF R                S EA+DG L  V E+ V G  VQ  ++LD  L  E+K
Sbjct: 167 KDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNPVHEILVHGVSVQHASQLDESLADEIK 226

Query: 692 ALADP-EDPYDTVTGKTMCTYDFYE 763
              DP +D Y+ V G+T+C +DFYE
Sbjct: 227 MCHDPCKDKYEAVIGRTLCAHDFYE 251


>AY119237-1|AAM51097.1|  300|Drosophila melanogaster SD19372p
           protein.
          Length = 300

 Score = 75.4 bits (177), Expect = 9e-14
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +3

Query: 264 FGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSISH 443
           FGDV+ +CMGGT  RM Q A   + +I      G  + D+     RY+MYKVGPVL +SH
Sbjct: 41  FGDVRVICMGGTGSRMRQLAL-YLRDILVVTESGDPV-DLCERGNRYAMYKVGPVLCVSH 98

Query: 444 GMGIPSVGILLHEVIKLMYHAK 509
           G+G  S  ++LHE+IKL+ +A+
Sbjct: 99  GVGSSSFSVVLHELIKLLKYAR 120



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPV  R                S  A +G LRN  E+ +LG+ V RPA+    ++R+L 
Sbjct: 122 QDPVLLRIGTCGGLGVPPGTVVASKNAFNGLLRNEHEIAILGQRVVRPAQFSEDVIRDLL 181

Query: 692 AL-ADPEDPYDTVTGKTMCTYDFYE 763
           A   D  D + T++  TM T  FYE
Sbjct: 182 AFGVDANDGFQTISANTMGTDCFYE 206



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 163 DGTVRLRNPNIELMDQDILYHL 228
           D TV L NP++E    D LYHL
Sbjct: 3   DKTVELMNPHLETARSDYLYHL 24


>AE014134-535|AAF51164.2|  300|Drosophila melanogaster CG17224-PB,
           isoform B protein.
          Length = 300

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +3

Query: 264 FGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSISH 443
           FGDV+ +CMGGT  RM Q A   + +I      G  + D+     RY+MYKVGPVL +SH
Sbjct: 41  FGDVRVICMGGTGSRMRQLAL-YLRDILVVSESGDPV-DLCERGNRYAMYKVGPVLCVSH 98

Query: 444 GMGIPSVGILLHEVIKLMYHAK 509
           G+G  S  ++LHE+IKL+ +A+
Sbjct: 99  GVGSSSFSVVLHELIKLLKYAR 120



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPV  R                S  A +G LRN  E+ +LG+ V RPA+    ++R+L 
Sbjct: 122 QDPVLLRIGTCGGLGVPPGTVVASKNAFNGLLRNEHEIAILGQRVVRPAQFSEDVIRDLL 181

Query: 692 AL-ADPEDPYDTVTGKTMCTYDFYE 763
           A   D  D + T++  TM T  FYE
Sbjct: 182 AFGVDANDGFQTISANTMGTDCFYE 206



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 163 DGTVRLRNPNIELMDQDILYHL 228
           D TV L NP++E    D LYHL
Sbjct: 3   DKTVELMNPHLETARSDYLYHL 24


>AE014134-534|AAF51165.2|  300|Drosophila melanogaster CG17224-PA,
           isoform A protein.
          Length = 300

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +3

Query: 264 FGDVKFVCMGGTPKRMEQFAYTIMAEIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSISH 443
           FGDV+ +CMGGT  RM Q A   + +I      G  + D+     RY+MYKVGPVL +SH
Sbjct: 41  FGDVRVICMGGTGSRMRQLAL-YLRDILVVSESGDPV-DLCERGNRYAMYKVGPVLCVSH 98

Query: 444 GMGIPSVGILLHEVIKLMYHAK 509
           G+G  S  ++LHE+IKL+ +A+
Sbjct: 99  GVGSSSFSVVLHELIKLLKYAR 120



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +2

Query: 512 RDPVFFRXXXXXXXXXXXXXXXXSDEAVDGALRNVLELTVLGKIVQRPAKLDRRLVRELK 691
           +DPV  R                S  A +G LRN  E+ +LG+ V RPA+    ++R+L 
Sbjct: 122 QDPVLLRIGTCGGLGVPPGTVVASKNAFNGLLRNEHEIAILGQRVVRPAQFSEDVIRDLL 181

Query: 692 AL-ADPEDPYDTVTGKTMCTYDFYE 763
           A   D  D + T++  TM T  FYE
Sbjct: 182 AFGVDANDGFQTISANTMGTDCFYE 206



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 163 DGTVRLRNPNIELMDQDILYHL 228
           D TV L NP++E    D LYHL
Sbjct: 3   DKTVELMNPHLETARSDYLYHL 24


>AY121689-1|AAM52016.1|  518|Drosophila melanogaster RE49550p
           protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 193 IELMDQDILYHLALGSGSHDLLRCLETSSLCAW 291
           IE ++ D+   L LGSGS+  + C+ T+ + ++
Sbjct: 324 IECVETDVPIDLGLGSGSYKFILCINTNGIISY 356


>AY094947-1|AAM11300.1|  233|Drosophila melanogaster RH63449p
           protein.
          Length = 233

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
 Frame = +1

Query: 7   TKMNGHTNGINAVQSQATCSRNPHRRTFDNDDEFQEADGTPVGADDNSVRYPDGTVRLRN 186
           +K +G   G     + A  S+   R    +D+E  E D       D+   YP  +   R 
Sbjct: 39  SKPSGSDGGRKRKSAAANASKAKRRMAKVSDEESDEEDDLETDPSDDDFDYPSASTSKRP 98

Query: 187 PNIELMDQDI-LYHLALGSGSHDLLR--CLETSSLCAW 291
            ++    Q + L  L L     DL+    L+ + LC W
Sbjct: 99  QSLPPKKQFVKLSQLDLLVKKSDLMENDWLKNNRLCLW 136


>AE014134-1611|AAF52752.1|  233|Drosophila melanogaster CG13108-PA
           protein.
          Length = 233

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
 Frame = +1

Query: 7   TKMNGHTNGINAVQSQATCSRNPHRRTFDNDDEFQEADGTPVGADDNSVRYPDGTVRLRN 186
           +K +G   G     + A  S+   R    +D+E  E D       D+   YP  +   R 
Sbjct: 39  SKPSGSDGGRKRKSAAANASKAKRRMAKVSDEESDEEDDLETDPSDDDFDYPSASTSKRP 98

Query: 187 PNIELMDQDI-LYHLALGSGSHDLLR--CLETSSLCAW 291
            ++    Q + L  L L     DL+    L+ + LC W
Sbjct: 99  QSLPPKKQFVKLSQLDLLVKKSDLMENDWLKNNRLCLW 136


>AE013599-2450|AAF57878.2|  518|Drosophila melanogaster CG6568-PA
           protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 193 IELMDQDILYHLALGSGSHDLLRCLETSSLCAW 291
           IE ++ D+   L LGSGS+  + C+ T+ + ++
Sbjct: 324 IECVETDVPIDLGLGSGSYKFILCINTNGIISY 356


>X81321-1|CAA57101.1|  512|Drosophila melanogaster male specific
           lethal-3 protein.
          Length = 512

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 97  DDEFQEADGTPVGADDNSVRYPDGTVRLRNPNIELMDQDILYHLALGSGSH 249
           D E    DGTPVG          G + +  P  E   Q  L ++   SG +
Sbjct: 340 DTELIGLDGTPVGEGSGDTNGQIGVINIGGPEYEKQLQKCLLYIVTASGKN 390


>BT001896-1|AAN71685.1| 1285|Drosophila melanogaster SD19050p protein.
          Length = 1285

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -1

Query: 419  NFIHGVSVRKMTDVLQCGSTRQLVP----YLRHDCVCELFHAFRCSAHAHKLD 273
            NFI  V+V  +TD+L     + + P    Y R   + +  + F C   A KLD
Sbjct: 861  NFIENVTVCHLTDILDANKDKPVKPKKHRYCRLCLIRDSLNQFECLLFAKKLD 913


>AY058498-1|AAL13727.1|  558|Drosophila melanogaster LD03886p
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -1

Query: 419 NFIHGVSVRKMTDVLQCGSTRQLVP----YLRHDCVCELFHAFRCSAHAHKLD 273
           NFI  V+V  +TD+L     + + P    Y R   + +  + F C   A KLD
Sbjct: 134 NFIENVTVCHLTDILDANKDKPVKPKKHRYCRLCLIRDSLNQFECLLFAKKLD 186


>AE014296-1091|AAF50680.1| 1270|Drosophila melanogaster CG7376-PA
            protein.
          Length = 1270

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -1

Query: 419  NFIHGVSVRKMTDVLQCGSTRQLVP----YLRHDCVCELFHAFRCSAHAHKLD 273
            NFI  V+V  +TD+L     + + P    Y R   + +  + F C   A KLD
Sbjct: 846  NFIENVTVCHLTDILDANKDKPVKPKKHRYCRLCLIRDSLNQFECLLFAKKLD 898


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,455,230
Number of Sequences: 53049
Number of extensions: 847767
Number of successful extensions: 2564
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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