Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30796
(858 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 31 0.28
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 30 0.37
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 29 0.64
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 29 0.84
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 1.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.1
SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces pom... 27 2.6
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 27 3.4
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 3.4
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 4.5
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 4.5
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 27 4.5
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 26 6.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 6.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.0
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 26 6.0
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 26 6.0
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 7.9
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 26 7.9
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 26 7.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.9
SPBC15D4.04 |gpt2|gpt, alg7|UDP-N-acetylglucosamine--dolichyl-ph... 26 7.9
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 7.9
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 26 7.9
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 26 7.9
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 206 EKCARQERKIADIEIKQSPTSGNVSPKSPRKAESSP--PRKKHEISSTVRKVESSPRVKK 379
E C E + + T N + R +++ P P K + ++ V E P KK
Sbjct: 160 ESCLSTETSSSKFSAVTAATITNETQSEKRSSQTDPSLPFKTNSLNCDVT-YEEGPLTKK 218
Query: 380 IEGPSAVKKSESS 418
+ GP K S SS
Sbjct: 219 LRGPKKYKPSHSS 231
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 165 KEREVKDKSKNTAERNARDKKEKSPTSRSNRVRLAETFLQKVHEKLKAH-RLERNMK 332
K+R+V ++++ A KKE +R + AETF+ ++ + RL R+ K
Sbjct: 20 KKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRSAK 76
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 29.5 bits (63), Expect = 0.64
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 260 PTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSPAVKKHE 439
P+S N+ S + E S RK H S +K + PR K + S+ +K+++ ++K
Sbjct: 31 PSSSNIPRSSAKTKEHSADRKPHRNSE--KKTQGMPR-KNQQLASSERKTKNKKRLEKQS 87
Query: 440 SS 445
S+
Sbjct: 88 SA 89
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 29.1 bits (62), Expect = 0.84
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 185 QIQKHC*EKCARQERKIADIEIKQSPTSGNVSP-KSPRKAESSPPRKKHEISSTVRKVES 361
QI+ K + E+++ + GN SP ++P+K SPPR+KH +T V +
Sbjct: 55 QIKSPSDYKSSAHEQRVNHTTDSMAHVPGNNSPLQTPQK---SPPRQKHTAPATPIPVSA 111
Query: 362 SPRVK-KIEGPSAVKKSESSPAVKKHESSP 448
S K G + + P K + +SP
Sbjct: 112 SRHHKPHHSGLKNLLEKAMHPGHKSNANSP 141
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 278 SPKSPRKAESSP-PRKKHEISSTVRKVESSPRVKKIEGPSAVKKS 409
+P+ PRK P P+K+ E SS E P GP+ K+
Sbjct: 97 TPEEPRKLPGVPAPQKQSEASSVNSSTEKLPPPPSYPGPNTAHKN 141
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 230 KIADIEIKQSPTSGNVSPKSPRKAE---SSPPRKKHEISSTVRKVESSPRVKKIEGPSAV 400
K A EI + + +VSPK +K SSP K + + + + E S+
Sbjct: 34 KEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSS 93
Query: 401 KKSESSPAVKKHESS 445
+SESS + + SS
Sbjct: 94 SESESSSSESESSSS 108
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 215 ARQERKIADIEIKQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPS 394
A++++ +K++ + K P K++ EI+ K + SP+ K E
Sbjct: 2 AKKDKTSVKKSVKETASKKGAIEK-PSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKR 60
Query: 395 AVKKSESSPAVKKHESS 445
A S +VKK + S
Sbjct: 61 ASSPEPSKKSVKKQKKS 77
Score = 25.8 bits (54), Expect = 7.9
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +2
Query: 185 QIQKHC*EKCARQERKIADIEIKQSPTSGN--VSPKSPRKA--ESSPPRKKHEISSTVRK 352
+I K ++ A+Q K D+ K+S SP+ +K+ + +KK E SS
Sbjct: 31 KITKEAAKEIAKQSSK-TDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESES 89
Query: 353 VESSPRVKKIEGPSAVKKSESSPAVKKHESS 445
SS + S SES + + SS
Sbjct: 90 ESSSSESESSSSESESSSSESESSSSESSSS 120
>SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 184
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 195 FWICLSLLSPFQLYLSFPYLFRISFSFPFLFHFYLSFLSPFCF 67
FW + F L SF +F + +P L +YL LS FCF
Sbjct: 118 FWYSSMRATLFALVASFFRIFDVPVFWPILVVYYL-VLSFFCF 159
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +2
Query: 257 SPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSPAVKKH 436
+P + + S + +S P ++ +ST K ++P+ K+E PSA + + +P + +
Sbjct: 308 TPQTLSTSETKHIRPNNSTPYQRRAETSTKPKAVATPQ--KVEAPSAPRLQKRAPRQQSN 365
Query: 437 ESS 445
+S+
Sbjct: 366 DSA 368
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 180 SLLSPFQLYLSFPY--LFRISFSFPFLFHFYLS 88
S LS F+ L F + LF +SFSF F F F+LS
Sbjct: 108 SELSLFRCLLLFFFFLLFFLSFSFSFSFLFFLS 140
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 296 KAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESS 418
++ SSP ++ ++S R VESS +EG S + S +
Sbjct: 250 ESSSSPMMRRSSLNSNRRSVESSSSAAFVEGQSFILDSNGA 290
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +2
Query: 266 SGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSPAVKKHESS 445
SGN S K P K S+P +S R + ++ S K +++
Sbjct: 292 SGNESSKEPDKEHSTPIHPTTPVSRCARPSSRQQTISILQAQSPFLKKSDKERANLNKTM 351
Query: 446 PDLNK 460
+NK
Sbjct: 352 VSINK 356
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +2
Query: 206 EKCARQERKIADIEIKQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIE 385
+K A E+ + E S +S + S S ++ESS SS+ + ESS
Sbjct: 88 KKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSS 147
Query: 386 GPSAVKKSESSPAVKKHESS 445
S+ +SESS SS
Sbjct: 148 SSSSDSESESSSEGSDSSSS 167
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 222 CLAHFSQQCFWICLSLLSPFQLYLSFPYLFRISFSFPF 109
CLA + I LL PF + LSF L + + FPF
Sbjct: 171 CLAFVPVSFYQISRGLLLPFTILLSFVLLKQKTRLFPF 208
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 260 PTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSP 421
P + + P SP + P +KK + S + E R+++ A K S +SP
Sbjct: 502 PDADSSEPASPVLMPTKPEKKKGRVLSETEQAEKIRRLQQQLDRFAGKTSPTSP 555
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 6.0
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = +2
Query: 185 QIQKHC*EKC------ARQERKIADIEIKQSPT-SGNVSPKSPRKAESSPPRKKHEISST 343
Q+QKH EK A+ K + +Q P+ V P +P ++ P KK +
Sbjct: 416 QVQKHNEEKVETPKPEAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRD-EDN 474
Query: 344 VRKVESSPRVKKIEGPSAVKKSESSPAVKKHESSPDLNK 460
+K E+ + K+ + P V+KS PA S D+ K
Sbjct: 475 HQKEETVTQPKREKTP--VEKSFPKPASSPVTFSEDVKK 511
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +2
Query: 278 SPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSPAVKKHESSPDLN 457
S KSP E S +K E SST K K S+ +++ S +K E+S +
Sbjct: 80 SSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQH--QKPETSSQIG 137
Query: 458 K 460
K
Sbjct: 138 K 138
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 251 KQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGPSAVKKSESSPAVK 430
K+ P N+SP +P+K + P + + S+ SP + K G V +++S
Sbjct: 523 KRRPEDSNISPTNPKKLHTLP--RSPQYSTVDSNSVLSPAMPK--GYMFVNENQS----M 574
Query: 431 KHESS 445
KHESS
Sbjct: 575 KHESS 579
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 218 RQERKIADIEIKQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPR 370
RQ +K + EI + K K E SP + EIS +V VE PR
Sbjct: 22 RQTKKY-NFEIDEPEEQEKKDEKEDDK-EESPSKSLEEISQSVSPVEEEPR 70
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -1
Query: 255 CLISMSAIFLSCLAHFSQQCFWICLSLLSPFQLYLSFPYLFRISFSFPFLFHFYLSFLSP 76
C +S S I C + +++P +Y +F Y+ + + HFYL +P
Sbjct: 260 CFLS-SFIITGVFFFIMSICPMVISLIIAPLWIYFTFKYITTCIHANIDIVHFYLE--TP 316
Query: 75 FCFGL 61
F G+
Sbjct: 317 FLAGI 321
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -1
Query: 408 LFFTADGPSIFFTRGELST---FLTVDEISCFFLGGELSAFRG 289
L TA+ S+ T G + +L VDE C FLG + G
Sbjct: 173 LDLTAECISLMLTLGNVKPGGRYLVVDETGCMFLGSLIDRVAG 215
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 162 EKEREVKDKSKNTAERNARDKKEK 233
EKERE + K K R A +KK++
Sbjct: 41 EKEREKEQKRKEREAREAEEKKKR 64
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 162 EKEREVKDKSKNTAERNARDKKEKSPTSRSNRV 260
E RE K K+ +++ +DKKE S SRS+ V
Sbjct: 612 ESHRESKSAEKD--KKDKKDKKEDSKRSRSHSV 642
>SPBC15D4.04 |gpt2|gpt,
alg7|UDP-N-acetylglucosamine--dolichyl-phosphateN-
acetylglucosaminephosphotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 144 PYLFRISFSFPFLFHFYLSFLSPFC 70
P+L R + FL++FY++ ++ FC
Sbjct: 186 PFLKRSLINLGFLYYFYMAAVAIFC 210
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 356 ESSPRVKKIEGPSAVKKSESSPA-VKKHESSPDLNK 460
E SP+ +++E P V K E + V+ ES+P + K
Sbjct: 912 ELSPQKRRVENPKPVVKDEGPVSIVEDEESTPVVTK 947
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 25.8 bits (54), Expect = 7.9
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +2
Query: 206 EKCARQERKIADIEIKQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIE 385
++ R++RK + K + S P+K E +KK E K SS + K
Sbjct: 161 DEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKE-HKKKDKESSSKKRKSGS 219
Query: 386 GPSAVKKSESSPAVKKHESSPDLNK 460
KK + K ES+ + K
Sbjct: 220 SDKEEKKKKKIKLKDKPESTSSVEK 244
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 25.8 bits (54), Expect = 7.9
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +2
Query: 212 CARQERKIADIEIKQSPTSGNVSPKSPRKAESSPPRKKHEISSTVRKVESSPRVKKIEGP 391
C + +I K T + P+K++S PP S+++ +ESS + + P
Sbjct: 632 CNQTFAPTVEITAKDDETESTSKGEEPQKSKSEPPSAGIN-STSMDNLESSGQALATDDP 690
Query: 392 SAV-----KKSESSPAVKKHESSP 448
S +K + A++K P
Sbjct: 691 SQFENLKHRKKQLQEAIQKFNYKP 714
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,270,655
Number of Sequences: 5004
Number of extensions: 37558
Number of successful extensions: 235
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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