Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30795
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 41 7e-04
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 39 0.004
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 34 0.077
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 34 0.077
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 31 0.54
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 31 0.54
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 31 0.71
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 31 0.71
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 31 0.71
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 29 2.2
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 29 2.2
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 29 2.2
U40413-5|AAK39175.1| 599|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 5.0
Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical pr... 27 8.8
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 27 8.8
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
C+ +PP +Q CNR CP W+ PW+ CS CG
Sbjct: 446 CTVERPPVKQTCNRFACP-EWQAGPWSACSEKCG 478
Score = 33.1 bits (72), Expect = 0.18
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
+++KP + C + C W W CS++CG
Sbjct: 386 NATKPEFEKSCETVDCEAEWFTGDWESCSSTCG 418
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 9 CSSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
C + KP + C N C W W+ C+A CG G
Sbjct: 628 CQAEKPEGKTNCTNEEKCTGTWYTSSWSECTAECGGG 664
Score = 31.1 bits (67), Expect = 0.71
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCS SCG+GV
Sbjct: 350 WTPCSVSCGKGV 361
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 SSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
S+ P + C + PC W W+ C+ CG G
Sbjct: 569 STEIPTDTRSCATQPPCEYEWTVSEWSKCTTECGHG 604
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
C+ +PP +Q CNR CP W+ PW+ CS CG
Sbjct: 446 CTVERPPVKQTCNRFACP-EWQAGPWSACSEKCG 478
Score = 33.1 bits (72), Expect = 0.18
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
+++KP + C + C W W CS++CG
Sbjct: 386 NATKPEFEKSCETVDCEAEWFTGDWESCSSTCG 418
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 9 CSSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
C + KP + C N C W W+ C+A CG G
Sbjct: 628 CQAEKPEGKTNCTNEEKCTGTWYTSSWSECTAECGGG 664
Score = 31.1 bits (67), Expect = 0.71
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCS SCG+GV
Sbjct: 350 WTPCSVSCGKGV 361
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 SSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
S+ P + C + PC W W+ C+ CG G
Sbjct: 569 STEIPTDTRSCATQPPCEYEWTVSEWSKCTTECGHG 604
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
C+ +PP +Q CNR CP W+ PW+ CS CG
Sbjct: 446 CTVERPPVKQTCNRFACP-EWQAGPWSACSEKCG 478
Score = 33.1 bits (72), Expect = 0.18
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCG 110
+++KP + C + C W W CS++CG
Sbjct: 386 NATKPEFEKSCETVDCEAEWFTGDWESCSSTCG 418
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 9 CSSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
C + KP + C N C W W+ C+A CG G
Sbjct: 628 CQAEKPEGKTNCTNEEKCTGTWYTSSWSECTAECGGG 664
Score = 31.1 bits (67), Expect = 0.71
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCS SCG+GV
Sbjct: 350 WTPCSVSCGKGV 361
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 12 SSSKPPHRQPC-NRIPCPVYWREQPWTPCSASCGRG 116
S+ P + C + PC W W+ C+ CG G
Sbjct: 569 STEIPTDTRSCATQPPCEYEWTVSEWSKCTTECGHG 604
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 KPPHR-QPCNRIPCPVYWREQPWTPCSASCGRG 116
+PP + +PCN+ PCP +W ++ CS SCG G
Sbjct: 162 RPPEKSRPCNQHPCPPFWLTSKYSDCSMSCGSG 194
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
C KP + CN + CP W WT CS SC G
Sbjct: 223 CHFKKPQETETCNVVACPATWVTAQWTECSRSCDSG 258
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSA 101
+S +PP +PC+R CP W W+ CS+
Sbjct: 523 ASVRPPETRPCHREDCP-RWEASQWSECSS 551
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 15 SSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
+++P C C WR W CS+ CG G
Sbjct: 584 TNRPATTMDCPNQNCKAEWRTSDWGSCSSECGTG 617
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 60 PVYWREQPWTPCSASC 107
P WR WT CSASC
Sbjct: 117 PYQWRYGDWTQCSASC 132
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 KPPHR-QPCNRIPCPVYWREQPWTPCSASCGRG 116
+PP + +PCN+ PCP +W ++ CS SCG G
Sbjct: 496 RPPEKSRPCNQHPCPPFWLTSKYSDCSMSCGSG 528
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
C KP + CN + CP W WT CS SC G
Sbjct: 557 CHFKKPQETETCNVVACPATWVTAQWTECSRSCDSG 592
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSA 101
+S +PP +PC+R CP W W+ CS+
Sbjct: 857 ASVRPPETRPCHREDCP-RWEASQWSECSS 885
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 15 SSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
+++P C C WR W CS+ CG G
Sbjct: 918 TNRPATTMDCPNQNCKAEWRTSDWGSCSSECGTG 951
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
+ ++P + C C W W+ C+ASCG+GV
Sbjct: 280 NGTRPAAEENCVSTSCG-RWEAGKWSKCTASCGQGV 314
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +3
Query: 6 MCSSSKPP--HRQPCNRIPCP--VYWREQPWTPCSASCGRG 116
+C+ P +PC + CP W WT C CG G
Sbjct: 214 LCADKLRPKVEARPCPMLICPSRCRWMAADWTECVPHCGEG 254
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 60 PVYWREQPWTPCSASC 107
P WR WT CSASC
Sbjct: 451 PYQWRYGDWTQCSASC 466
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
+S +P Q CN CP +WR W+ CS SCG G
Sbjct: 1226 ASDRPASHQTCNLGTCP-FWRNTDWSACSVSCGIG 1259
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 CSSSKPPHR-QPCNRIPCPVYWREQPWTPCSASCGRGV 119
C +K P Q C+ +PC W+ W+PCS +CG G+
Sbjct: 1279 CGDTKMPETSQTCHLLPC-TSWKPSHWSPCSVTCGSGI 1315
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
K + CNRIPCP W W+ CS SC GV
Sbjct: 1064 KEATERECNRIPCP-RWVYGHWSECSRSCDGGV 1095
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPVY----WREQPWTPCSASCGRGV 119
KP CN CP W+ PWT CS SCG GV
Sbjct: 1526 KPKMFDKCNEELCPPLTNNSWQISPWTHCSVSCGGGV 1562
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 6 MCSSSKPPHR-QPCNRIPCPVYWREQPWTPCSASCGRGV 119
MC ++ P + C+ CP W W CS SCG GV
Sbjct: 1791 MCELARAPTSIRECDTSNCPYEWVPGDWQTCSKSCGEGV 1829
Score = 35.1 bits (77), Expect = 0.044
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 15 SSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
+ KP C CP W+ W+ CS +CGRG+
Sbjct: 1680 TKKPVEEVRCRTKHCP-RWKTTTWSSCSVTCGRGI 1713
Score = 34.7 bits (76), Expect = 0.058
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 60 PVYWREQPWTPCSASCGRG 116
P+ W PWT CSA+CG G
Sbjct: 1368 PIRWATGPWTACSATCGNG 1386
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 21 KPPHRQPCNRIPCP--VYWREQPWTPCSASCGRGV 119
KP Q C PC W PW CS +CG+G+
Sbjct: 1868 KPNESQTCELNPCDSEFKWSFGPWGECSKNCGQGI 1902
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 42 CNRIPCPVY-WREQPWTPCSASCGRG 116
C + CP Y W PW+ C C RG
Sbjct: 1745 CFPVACPAYRWNVTPWSKCKDECARG 1770
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 51 IPCPVYWREQPWTPCSASCGRG 116
+P V W+ W+ CSA CGRG
Sbjct: 1634 LPPVVSWQTSAWSACSAKCGRG 1655
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 33 RQPCNRIPCPVYWREQPWTPCSASCGRGV 119
++ CN C +W+ W+ CSA CG GV
Sbjct: 1121 QEHCNEHAC-TWWQFGVWSDCSAKCGDGV 1148
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPV------YWREQPWTPCSASCGRG 116
+P + C PCP W W+ CSASCG G
Sbjct: 1471 RPTSARNCRLEPCPKGEEHIGSWIIGDWSKCSASCGGG 1508
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 12 SSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
+S +P Q CN CP +WR W+ CS SCG G
Sbjct: 1226 ASDRPASHQTCNLGTCP-FWRNTDWSACSVSCGIG 1259
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 CSSSKPPHR-QPCNRIPCPVYWREQPWTPCSASCGRGV 119
C +K P Q C+ +PC W+ W+PCS +CG G+
Sbjct: 1279 CGDTKMPETSQTCHLLPC-TSWKPSHWSPCSVTCGSGI 1315
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
K + CNRIPCP W W+ CS SC GV
Sbjct: 1064 KEATERECNRIPCP-RWVYGHWSECSRSCDGGV 1095
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPVY----WREQPWTPCSASCGRGV 119
KP CN CP W+ PWT CS SCG GV
Sbjct: 1526 KPKMFDKCNEELCPPLTNNSWQISPWTHCSVSCGGGV 1562
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 6 MCSSSKPPHR-QPCNRIPCPVYWREQPWTPCSASCGRGV 119
MC ++ P + C+ CP W W CS SCG GV
Sbjct: 1791 MCELARAPTSIRECDTSNCPYEWVPGDWQTCSKSCGEGV 1829
Score = 35.1 bits (77), Expect = 0.044
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 15 SSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
+ KP C CP W+ W+ CS +CGRG+
Sbjct: 1680 TKKPVEEVRCRTKHCP-RWKTTTWSSCSVTCGRGI 1713
Score = 34.7 bits (76), Expect = 0.058
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 60 PVYWREQPWTPCSASCGRG 116
P+ W PWT CSA+CG G
Sbjct: 1368 PIRWATGPWTACSATCGNG 1386
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 21 KPPHRQPCNRIPCP--VYWREQPWTPCSASCGRGV 119
KP Q C PC W PW CS +CG+G+
Sbjct: 1868 KPNESQTCELNPCDSEFKWSFGPWGECSKNCGQGI 1902
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 42 CNRIPCPVY-WREQPWTPCSASCGRG 116
C + CP Y W PW+ C C RG
Sbjct: 1745 CFPVACPAYRWNVTPWSKCKDECARG 1770
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 51 IPCPVYWREQPWTPCSASCGRG 116
+P V W+ W+ CSA CGRG
Sbjct: 1634 LPPVVSWQTSAWSACSAKCGRG 1655
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 33 RQPCNRIPCPVYWREQPWTPCSASCGRGV 119
++ CN C +W+ W+ CSA CG GV
Sbjct: 1121 QEHCNEHAC-TWWQFGVWSDCSAKCGDGV 1148
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Frame = +3
Query: 21 KPPHRQPCNRIPCPV------YWREQPWTPCSASCGRG 116
+P + C PCP W W+ CSASCG G
Sbjct: 1471 RPTSARNCRLEPCPKGEEHIGSWIIGDWSKCSASCGGG 1508
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 42 CNRIPCPVYWRE-QPWTPCSASCGRGVCPGVR 134
C CP YW + PW+ CS SCG+GVC R
Sbjct: 588 CQIASCP-YWGDWTPWSGCSVSCGQGVCERTR 618
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 27 PHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
P PC C V+ PW+ C+A+CG G
Sbjct: 338 PSTIPCQVPECAVWTLWSPWSLCTATCGVG 367
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 42 CNRIPCPVYWREQPWTPCSASCG 110
CN+ PCP + + WT C CG
Sbjct: 488 CNQQPCPEWSQWTAWTVCDERCG 510
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 IPCPVYWREQPWTPCSASCGRGV 119
+PCP + WT C SCG+ +
Sbjct: 395 LPCPTWSSWMSWTGCGNSCGKSI 417
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 42 CNRIPCPVYWREQPWTPCSASCGRG 116
C++ PCP + W CS CG G
Sbjct: 440 CDKRPCPHWSNWGQWEKCSKECGAG 464
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 42 CNRIPCPVYWRE-QPWTPCSASCGRGVCPGVR 134
C CP YW + PW+ CS SCG+GVC R
Sbjct: 588 CQIASCP-YWGDWTPWSGCSVSCGQGVCERTR 618
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 27 PHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
P PC C V+ PW+ C+A+CG G
Sbjct: 338 PSTIPCQVPECAVWTLWSPWSLCTATCGVG 367
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 42 CNRIPCPVYWREQPWTPCSASCG 110
CN+ PCP + + WT C CG
Sbjct: 488 CNQQPCPEWSQWTAWTVCDERCG 510
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 51 IPCPVYWREQPWTPCSASCGRGV 119
+PCP + WT C SCG+ +
Sbjct: 395 LPCPTWSSWMSWTGCGNSCGKSI 417
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 42 CNRIPCPVYWREQPWTPCSASCGRG 116
C++ PCP + W CS CG G
Sbjct: 440 CDKRPCPHWSNWGQWEKCSKECGAG 464
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 35.1 bits (77), Expect = 0.044
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 36 QPCNRIPCPVYWREQPWTPCSASCGRG 116
+PCN PC + W+ CSASCG G
Sbjct: 495 EPCNLGPCQTWSEWCEWSTCSASCGSG 521
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 6 MCSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRGV 119
+C K R C+ PC ++ Q W+ CSASCG G+
Sbjct: 587 LCQGPKTEQRA-CDGGPCSLWSPWQEWSTCSASCGSGM 623
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 36 QPCNRIPCPVYWREQPWTPCSASCGRGVCPGVRSR 140
+ C+ PCP + + + W CS +CG+GV VR R
Sbjct: 544 EQCSAGPCPEWSQWEDWGQCSVTCGQGV--AVRQR 576
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 36 QPCNRIPCPVYWREQPWTPCSASCGRGVCPGVRSRVR 146
Q C PC + W+ CS+ CG PG R+R R
Sbjct: 644 QFCYGPPCAEWTEWCEWSGCSSKCG----PGQRTRTR 676
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
CSS +PC+ C W E W+ CS SCG G
Sbjct: 790 CSSKHLQEERPCDNEGCWTNWDE--WSSCSQSCGGG 823
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 6 MCSSSKPPHRQPCNRIPCPV-----YWREQ-PWTPCSASCGRGVCPGVRS 137
+C+++ R CN+ CP W E WT CSA+CG G+ RS
Sbjct: 881 LCATANKQART-CNQQQCPSAFSLSVWSEWGEWTTCSATCGEGLQSRERS 929
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCSASCG GV
Sbjct: 1333 WTPCSASCGFGV 1344
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
CSS +PC+ C W E W+ CS SCG G
Sbjct: 790 CSSKHLQEERPCDNEGCWTNWDE--WSSCSQSCGGG 823
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 6 MCSSSKPPHRQPCNRIPCPV-----YWREQ-PWTPCSASCGRGVCPGVRS 137
+C+++ R CN+ CP W E WT CSA+CG G+ RS
Sbjct: 881 LCATANKQART-CNQQQCPSAFSLSVWSEWGEWTTCSATCGEGLQSRERS 929
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCSASCG GV
Sbjct: 1333 WTPCSASCGFGV 1344
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 9 CSSSKPPHRQPCNRIPCPVYWREQPWTPCSASCGRG 116
CSS +PC+ C W E W+ CS SCG G
Sbjct: 790 CSSKHLQEERPCDNEGCWTNWDE--WSSCSQSCGGG 823
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 6 MCSSSKPPHRQPCNRIPCPV-----YWREQ-PWTPCSASCGRGVCPGVRS 137
+C+++ R CN+ CP W E WT CSA+CG G+ RS
Sbjct: 881 LCATANKQART-CNQQQCPSAFSLSVWSEWGEWTTCSATCGEGLQSRERS 929
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 84 WTPCSASCGRGV 119
WTPCSASCG GV
Sbjct: 1333 WTPCSASCGFGV 1344
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 78 QPWTPCSASCGRGVCPGVRSRV 143
+PW+ CSA+CG+G+ +RSRV
Sbjct: 439 EPWSLCSATCGKGI--RIRSRV 458
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Frame = +3
Query: 42 CNRIPCPVYWREQP-----WTPCSASCGRG 116
C PCPV Q W+PCS SCG G
Sbjct: 753 CRLRPCPVKLTCQVGPWSRWSPCSVSCGEG 782
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +3
Query: 42 CNRIPCPVY----WREQPWTPCSASCGRGVCPGVRSRV 143
CN P P+ W + W+PCSASC GV VR+R+
Sbjct: 551 CNVTPDPLCKTTAWSD--WSPCSASCDEGV--RVRTRL 584
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 36 QPCNRIPCPVYWREQPWTPCSASCGRG 116
Q CN PC + W+ CS +CG G
Sbjct: 132 QACNAQPCCTWTAWSSWSACSVTCGSG 158
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 572 TNITLKLYIMQNLFVHKNDVIVFLY 646
TN+T++LY Q VH+ND I+ LY
Sbjct: 50 TNVTVQLYFKQIQKVHENDQIITLY 74
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 572 TNITLKLYIMQNLFVHKNDVIVFLY 646
TN+T++LY Q VH+ND I+ LY
Sbjct: 50 TNVTVQLYFKQIQKVHENDQIITLY 74
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 572 TNITLKLYIMQNLFVHKNDVIVFLY 646
TN+T++LY Q VH+ND I+ LY
Sbjct: 34 TNVTVQLYFKQIQKVHENDQIITLY 58
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 639 NTMTSFLCTNKFCIMYSFRVMFVTIYSIMWTF 544
N + +F+C FC++ ++ MF I SI W F
Sbjct: 115 NVVIAFMCIAYFCVIVAW-AMFYMISSIAWVF 145
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 639 NTMTSFLCTNKFCIMYSFRVMFVTIYSIMWTF 544
N + +F+C FC++ ++ MF I SI W F
Sbjct: 115 NVVIAFMCIAYFCVIVAW-AMFYMISSIAWVF 145
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 639 NTMTSFLCTNKFCIMYSFRVMFVTIYSIMWTF 544
N + +F+C FC++ ++ MF I SI W F
Sbjct: 115 NVVIAFMCIAYFCVIVAW-AMFYMISSIAWVF 145
>U40413-5|AAK39175.1| 599|Caenorhabditis elegans Hypothetical
protein C18B2.6 protein.
Length = 599
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 150 DAGHVSGRRDKRRVRTTPSKESRVAPSSKQGRGYGCRAGDVAALTTST 7
+A RRD RR R + SR P G G G + +V +TT T
Sbjct: 546 EAHEARQRRDMRRRRRNSTSHSRSTPKPHNGNGNG-KVVNVEMVTTHT 592
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 PATVSPALFTGGSNPGLLARRRADAAFVPASAHVSGVRRATMRTEAARGTPAL------- 198
P S GS PG + + A PA+ + A T AA GTP
Sbjct: 383 PTPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFE 442
Query: 199 QTPALPLSIESRSAVPGT 252
+TPA P RS+VP T
Sbjct: 443 ETPATP-----RSSVPAT 455
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 PATVSPALFTGGSNPGLLARRRADAAFVPASAHVSGVRRATMRTEAARGTPAL------- 198
P S GS PG + + A PA+ + A T AA GTP
Sbjct: 333 PTPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFE 392
Query: 199 QTPALPLSIESRSAVPGT 252
+TPA P RS+VP T
Sbjct: 393 ETPATP-----RSSVPAT 405
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 PATVSPALFTGGSNPGLLARRRADAAFVPASAHVSGVRRATMRTEAARGTPAL------- 198
P S GS PG + + A PA+ + A T AA GTP
Sbjct: 383 PTPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFE 442
Query: 199 QTPALPLSIESRSAVPGT 252
+TPA P RS+VP T
Sbjct: 443 ETPATP-----RSSVPAT 455
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Frame = +1
Query: 40 PATVSPALFTGGSNPGLLARRRADAAFVPASAHVSGVRRATMRTEAARGTPAL------- 198
P S GS PG + + A PA+ + A T AA GTP
Sbjct: 383 PTPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFE 442
Query: 199 QTPALPLSIESRSAVPGT 252
+TPA P RS+VP T
Sbjct: 443 ETPATP-----RSSVPAT 455
>Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical
protein R03D7.7 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 51 IPCPVYWREQPWTP-CSASCGRGVCPGVRSRV 143
+P P PW+ CS GR VCP +RS V
Sbjct: 256 LPAPRKDDRGPWSDHCSKKRGRVVCPKLRSMV 287
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 81 PWTPCSASCGRGVCPGVRSRVR 146
PWT CSA+C G C G R R R
Sbjct: 498 PWTACSATC--GAC-GSRMRTR 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,122,535
Number of Sequences: 27780
Number of extensions: 279778
Number of successful extensions: 947
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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