Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30793
         (410 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X66142-1|CAA46932.1|  854|Homo sapiens 3',5'-cyclic-nucleotide  ...    29   6.0  
X62694-1|CAA44571.1|   30|Homo sapiens cGMP  phosphodiesterase b...    29   6.0  
X62692-1|CAA44569.1|  854|Homo sapiens cGMP phosphodiesterase be...    29   6.0  
S41458-1|AAB22690.1|  854|Homo sapiens rod cGMP phosphodiesteras...    29   6.0  
BT009794-1|AAP88796.1|  853|Homo sapiens phosphodiesterase 6B, c...    29   6.0  
BC000249-1|AAH00249.1|  853|Homo sapiens phosphodiesterase 6B, c...    29   6.0  

>X66142-1|CAA46932.1|  854|Homo sapiens 3',5'-cyclic-nucleotide
           phosphodiesterase protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 208 VFLKYLNFATLYLKIYHLSYLHNC 231


>X62694-1|CAA44571.1|   30|Homo sapiens cGMP  phosphodiesterase beta
           subunit protein.
          Length = 30

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 1   VFLKYLNFATLYLKIYHLSYLHNC 24


>X62692-1|CAA44569.1|  854|Homo sapiens cGMP phosphodiesterase beta
           subunit protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 208 VFLKYLNFATLYLKIYHLSYLHNC 231


>S41458-1|AAB22690.1|  854|Homo sapiens rod cGMP phosphodiesterase
           beta-subunit protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 208 VFLKYLNFATLYLKIYHLSYLHNC 231


>BT009794-1|AAP88796.1|  853|Homo sapiens phosphodiesterase 6B,
           cGMP-specific, rod, beta (congenital stationary night
           bli protein.
          Length = 853

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 208 VFLKYLNFATLYLKIYHLSYLHNC 231


>BC000249-1|AAH00249.1|  853|Homo sapiens phosphodiesterase 6B,
           cGMP-specific, rod, beta (congenital stationary night
           bli protein.
          Length = 853

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  IFFRYFNFKLVYCKVHALSLSHIC 109
           +F +Y NF  +Y K++ LS  H C
Sbjct: 208 VFLKYLNFATLYLKIYHLSYLHNC 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,229,274
Number of Sequences: 237096
Number of extensions: 683629
Number of successful extensions: 834
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)