Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30792
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    26   0.64 
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    26   0.64 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.9  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 175 LNEIGSWFGRRSKTP 219
           L +IG++FGR SKTP
Sbjct: 16  LKDIGAFFGRSSKTP 30


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 175 LNEIGSWFGRRSKTP 219
           L +IG++FGR SKTP
Sbjct: 47  LKDIGAFFGRSSKTP 61


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = -2

Query: 315 VVGRMEPCQPS*VVRTYVAISPGSTESSGHGRRSLAAATEPRTDFVQLQLAEWSIRFSIV 136
           ++  ++P     ++ T  A SP S+  SG+G  +  A   P  + V+  + +     SI 
Sbjct: 668 LITNLQPDSEDKLLNTMPA-SPASSIKSGYGEGAPLAIVAPEKNSVKSAIVKSINVVSIA 726

Query: 135 AGRIVXGPCTA 103
           A  +  G C++
Sbjct: 727 AKTMREGRCSS 737


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -2

Query: 228 HGRRSLAAATEPRTDFVQLQLAEWSIRF-SIVAGRIVXG 115
           H RR  AA  + R +  +  +AEW   + S  AG    G
Sbjct: 870 HSRRGTAAGAQLRKEERETTIAEWQATWDSDAAGHQASG 908


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,336
Number of Sequences: 2352
Number of extensions: 10222
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)