Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30788
         (375 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75546-5|CAA99893.2|  335|Caenorhabditis elegans Hypothetical pr...    46   9e-06
Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical pr...    29   1.1  
AF016655-1|AAK72055.3|  318|Caenorhabditis elegans Serpentine re...    29   1.1  
AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical ...    28   1.9  
AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical p...    26   7.6  
Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical pr...    26   7.6  

>Z75546-5|CAA99893.2|  335|Caenorhabditis elegans Hypothetical
           protein R05D11.6 protein.
          Length = 335

 Score = 46.0 bits (104), Expect = 9e-06
 Identities = 16/36 (44%), Positives = 27/36 (75%)
 Frame = +2

Query: 2   EVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRY 109
           E+R++F+L H DD+P+ +L  L+Q++ N+  LGC Y
Sbjct: 21  ELRKAFMLAHYDDYPKIQLQCLSQLFINVTLLGCEY 56


>Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical
           protein ZK1037.8 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 134 MRFIVXEVDICILKIRYWYRFAPVSLIQLLENRLCVLKG 18
           + F     D  IL IR  +   PVS+I + ENR  VL G
Sbjct: 82  LNFTPVPTDAQILAIRAVFMLVPVSIIFMFENRYFVLFG 120


>AF016655-1|AAK72055.3|  318|Caenorhabditis elegans Serpentine
           receptor, class h protein297 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 134 MRFIVXEVDICILKIRYWYRFAPVSLIQLLENRLCVL 24
           + +I    DI  L IR  Y   P+S+I + ENR  +L
Sbjct: 82  LSWIGVPTDISELTIRTLYMLVPISIITMFENRYYIL 118


>AL023856-6|CAC15864.1|  332|Caenorhabditis elegans Hypothetical
           protein Y94A7B.9 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 113 VDICILKIRYWYRFAPVSLIQLLENRLCVLKGN 15
           +D+ ++     ++  PVS+I + ENR  VL GN
Sbjct: 92  MDVLVVCATAIFKVVPVSIISMFENRYFVLFGN 124


>AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.4 protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -2

Query: 188 LFFLLSLYLADTFSANTEMRFI-VXEVDICILKIRYWYRFAPVSLIQLLENRLCVL 24
           L  L   +L   F A   +  +     D+ +L ++  +   PVS+I + ENR  +L
Sbjct: 61  LSLLAQPFLCSPFLAGFPLGILKFAPTDVLVLVLKTVFMLVPVSIISMFENRYFIL 116


>Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 110 DICILKIRYWYRFAPVSLIQLLENRLCVL 24
           D+ +L I   +   PVS+I + ENR  VL
Sbjct: 95  DLLMLSIYTIFMLVPVSIISMFENRYFVL 123


>Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 110 DICILKIRYWYRFAPVSLIQLLENRLCVL 24
           D+ +L I   +   PVS+I + ENR  VL
Sbjct: 95  DLLMLSIYTIFMLVPVSIISMFENRYFVL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,258,809
Number of Sequences: 27780
Number of extensions: 116488
Number of successful extensions: 295
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)