Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30782
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p pro...   160   1e-39
AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-P...   160   1e-39

>AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p
           protein.
          Length = 210

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = +1

Query: 256 VLVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLV 435
           VLVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLV
Sbjct: 60  VLVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLV 119

Query: 436 DMAPKYILEQFLESXLLINIT 498
           DMAPKYILEQFLES LLINIT
Sbjct: 120 DMAPKYILEQFLESELLINIT 140



 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +2

Query: 119 RKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLM 256
           RKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDL+
Sbjct: 14  RKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLI 59



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 78  MDDDAETYKLWR 113
           MDD+AETYKLWR
Sbjct: 1   MDDEAETYKLWR 12


>AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-PA
           protein.
          Length = 210

 Score =  160 bits (388), Expect = 1e-39
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = +1

Query: 256 VLVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLV 435
           VLVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLV
Sbjct: 60  VLVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLV 119

Query: 436 DMAPKYILEQFLESXLLINIT 498
           DMAPKYILEQFLES LLINIT
Sbjct: 120 DMAPKYILEQFLESELLINIT 140



 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +2

Query: 119 RKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLM 256
           RKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDL+
Sbjct: 14  RKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLI 59



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 78  MDDDAETYKLWR 113
           MDD+AETYKLWR
Sbjct: 1   MDDEAETYKLWR 12


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,756,653
Number of Sequences: 53049
Number of extensions: 438452
Number of successful extensions: 972
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)