Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30782
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006665-4|AAF39906.1|  211|Caenorhabditis elegans Hypothetical ...   136   1e-32
Z50006-6|CAA90298.1|  334|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    27   5.7  
U58753-4|AAC24435.2|  312|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z30215-3|CAA82935.1|  325|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z75542-3|CAA99860.1|  359|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>AC006665-4|AAF39906.1|  211|Caenorhabditis elegans Hypothetical
           protein H27M09.2 protein.
          Length = 211

 Score =  136 bits (328), Expect = 1e-32
 Identities = 61/90 (67%), Positives = 76/90 (84%)
 Frame = +1

Query: 229 EKTSKK*FDVLVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGM 408
           +K ++    +LVAHNDDP DQMFVFFP++AKIGIKTIK  C +MQE+NI RAI+VVQ GM
Sbjct: 52  KKPARSDLTILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGM 111

Query: 409 SPSAKQSLVDMAPKYILEQFLESXLLINIT 498
           +PSAKQS+ DMAPKY+LE FLE+ L++NIT
Sbjct: 112 TPSAKQSIGDMAPKYMLEHFLEAELMVNIT 141



 Score = 80.2 bits (189), Expect = 8e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +2

Query: 119 RKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDL 253
           RKTV+Q+ HDRGYLV QDELDQ LE FK Q+GD+PSEK+PARSDL
Sbjct: 15  RKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDL 59


>Z50006-6|CAA90298.1|  334|Caenorhabditis elegans Hypothetical
           protein T07C5.5 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 138 NCIT-VLRXYARVCKFLRHHPCFIIYLKLINPFPTNDNFIDSLVI 7
           NC T VL      C+F R H C I+ +  ++      N I+ L++
Sbjct: 49  NCPTIVLDSGESQCRFCRFHKCIIVGMIFLDAVDDPTNIINKLLV 93


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
            protein F47C12.1 protein.
          Length = 1827

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -3

Query: 446  GAISTSDCLADGDIPACTTTIAL*IFSSCILVQYVFIV--FIP--ILASSGKKTNI 291
            GAI+   C   G +P  + T+   + +SC+L + V IV  F+P    A +   TN+
Sbjct: 912  GAIAKFSCKRPGFVPFPSDTLQCTLGASCVLSEDVGIVSGFVPDGAFADNSDSTNL 967


>U58753-4|AAC24435.2|  312|Caenorhabditis elegans Hypothetical
           protein W03B1.7 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -2

Query: 408 HSRLYNNNSPMNILFLHSCTICLYSFYTNFSFIRKENKHLIRWIIIMSH 262
           +SR +    P+ +L +    ICLY F+ + + I    K  ++ ++ MS+
Sbjct: 41  YSRRFKRILPLYLLIILISMICLYKFFPD-TAIESNQKSAVQALLFMSN 88


>Z30215-3|CAA82935.1|  325|Caenorhabditis elegans Hypothetical
           protein F40F12.3 protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 393 NNNSPMNILFLHSCTICLYSFYTNFSFI 310
           NN  P N+L LH+  +   SF T FS +
Sbjct: 274 NNIRPHNLLELHTTPLTTPSFLTRFSIV 301


>Z75542-3|CAA99860.1|  359|Caenorhabditis elegans Hypothetical
           protein F55D12.3 protein.
          Length = 359

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 138 NCITVLRXYARVCKFLRHHPCFIIYLKLINPFPTNDNFIDSLV 10
           NC T+     + C+F R H C +  + L++ F   +  IDS +
Sbjct: 56  NCSTIAVETEKFCRFCRFHKCILAGMILVD-FDPIEVKIDSKI 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,324,901
Number of Sequences: 27780
Number of extensions: 233735
Number of successful extensions: 659
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)