Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30771
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93394-2|CAB07701.2|  251|Caenorhabditis elegans Hypothetical pr...    27   2.6  
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    27   2.6  
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    26   7.9  
AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm rece...    26   7.9  

>Z93394-2|CAB07701.2|  251|Caenorhabditis elegans Hypothetical
           protein Y48E1C.3 protein.
          Length = 251

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 149 HIDDLSEHIVIDESLTA 199
           HI+DLS H+ +DE LTA
Sbjct: 188 HINDLSMHLKVDEILTA 204


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
            protein H11E01.3 protein.
          Length = 1464

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 11   NGEKVIIDYTDTGGSSRQDDVQELPSSETANHTHSPVDSDSIEXRIHIDDLSEHI 175
            N E  ++  T+      + D++   +S T   T SPV  + +E R+  D+++EH+
Sbjct: 1169 NQESPVMSETEAIPIVDRIDLEAYHNSPTKEST-SPVTVNPVEVRVSADEVAEHL 1222


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
 Frame = +2

Query: 38  TDTGGSSRQDDVQ--ELPSSETANHTHSPVDSDSIEXRIHIDDLSEHIVIDESLTAQXQT 211
           T+T G+ +   V+  ELP+  T NH   P    S+         S H+  D     Q   
Sbjct: 99  TNTDGNRKNQRVRFNELPNYSTPNHYSVPPRKCSLAPNFFSSQNSHHMYPD-----QYTP 153

Query: 212 XMWSEDKFL---QIAPGEIKFQRVCYLTHMQRNYHFQPFTLGN 331
             W  ++F+   Q+ P     Q+     H Q+++  Q  + GN
Sbjct: 154 RTWQNNEFMPNHQVHPYHANHQQ----QHPQQHWRNQAASNGN 192


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 182  DESLTAQXQTXMWSEDKFLQIAPGEIKFQ-RVCYLTHMQRNYHFQ 313
            D  +  + +   W E K L  A  ++K Q  VC++T    +YH +
Sbjct: 3136 DYYMVDRMEALYWKESKELHTAANQLKLQDSVCFMT-FNFDYHLR 3179


>AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 30 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 160 IIDVYSXFYGVRIHR--GVSVICCFRGWKLLHII 65
           I+  ++     R  R  G +++ CF GWK++ +I
Sbjct: 102 IVSFFTILLAFRYWRMTGSTIVNCFTGWKIIFLI 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,256,731
Number of Sequences: 27780
Number of extensions: 153430
Number of successful extensions: 446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)