Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30771
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.33 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   0.76 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   2.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   2.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   4.1  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   4.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   9.4  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 115 GVSVICCFRGWKLLHIILSTRSSC 44
           G  ++CC RG+K   + +  R +C
Sbjct: 112 GCDLMCCGRGYKTQEVTVVERCAC 135


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 0.76
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 185 ESLTAQXQTXMWSEDKFLQIAP 250
           + LT Q    +W   +FL++AP
Sbjct: 119 KKLTVQTFNSVWGASRFLELAP 140


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 59  RQDDVQELPSSETANHTH 112
           R DD++  P++ TAN +H
Sbjct: 933 RSDDIRLSPAAYTANVSH 950


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 337 HEIPQGKWLEMIIPLHMCQITNSLELYFTW 248
           H   Q KW +M I       TN  + Y+ W
Sbjct: 122 HTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 133 GVRIHRGVSVICCFRGWKLLHIILSTRSSCIRVIN 29
           GVR+    + I  F     LH+I++   + +R +N
Sbjct: 260 GVRLSSARAFITPFENRSNLHVIVNATVTKVRTLN 294


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 304 IIPLHMCQITNSLELYFTW 248
           +  +H   +TNSL++ + W
Sbjct: 17  VTDIHSRNLTNSLKVIYEW 35


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 115 GVSVICCFRGWKLLHIILSTR 53
           G  ++CC RG+K   + +  R
Sbjct: 113 GCDLMCCGRGYKTQEVTVVER 133


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 65  DDVQELPSSETANHTHSPVDSDSIEXRIHIDDLS 166
           +D   +P S  ++ ++SP   +      H+ DLS
Sbjct: 26  NDSSGIPHSAESSASNSPDHYERFSPSTHLMDLS 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,773
Number of Sequences: 438
Number of extensions: 1718
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)