Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30769
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...    99   3e-21
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    36   0.027
Z66520-2|CAA91387.1|  168|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score = 98.7 bits (235), Expect = 3e-21
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 116 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKTERK 265
           H+GT+WK+NPFGGASHAKGIVLEK+GVEAKQPNSAIRKCVRVQLIK  +K
Sbjct: 31  HIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKK 80



 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +3

Query: 327 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 452
           V+GFGR GHAVGDIPGVRFK+VKVAN SL+AL+K KKERPRS
Sbjct: 102 VSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 253 DGKKVTAFVPRDGCLNHIEENDE 321
           +GKK+TAFVP DGCLN +EENDE
Sbjct: 77  NGKKITAFVPNDGCLNFVEENDE 99



 Score = 31.1 bits (67), Expect = 0.58
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 69  HRREQRWADKEFKKASTWVR 128
           HR+EQRW DK +KKA    R
Sbjct: 16  HRQEQRWNDKRYKKAHIGTR 35


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 35.5 bits (78), Expect = 0.027
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +2

Query: 152 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 247
           G SH KGIVL+ V    K+PNS  RKC  V+L
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL 103


>Z66520-2|CAA91387.1|  168|Caenorhabditis elegans Hypothetical
           protein F49E12.2 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 120 MWRLS*ILCPPIAVHDGGSRVTRRSYSSGFTHLDS 16
           +W+++ +L   +AVH+  S V  R +  G  H D+
Sbjct: 4   VWKVAIVLVALLAVHEVSSSVHHRHHKKGIIHRDA 38


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 268 TAFVPRDGCLNHIEEN 315
           T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.1 protein.
          Length = 543

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 554 FAVHNIYYVLGILHFRTYKQR-ASRQQ-VTYHN 462
           F + N++YVLG +     KQ  ASRQQ V ++N
Sbjct: 234 FMISNVFYVLGAIARNDRKQTPASRQQLVEFYN 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,637,295
Number of Sequences: 27780
Number of extensions: 294679
Number of successful extensions: 628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)