Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30768
(480 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 157 1e-38
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 157 1e-38
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 157 1e-38
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 157 1e-38
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 151 9e-37
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 29 6.4
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 29 6.4
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 6.4
AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to pre-pro-meg... 29 8.5
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 157 bits (382), Expect = 1e-38
Identities = 89/167 (53%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSA-YPLRSFTWWKY*VPCAASG 179
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP + +R V
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVR--------VRGGNKK 54
Query: 180 HR*LLLGIGMFNSQNPYH*CCV*----------CINNELVRTKTLVKNAIVVVDATPFRQ 329
+R L L +G F+ + CC NNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 55 YRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 111
Query: 330 WYESHYTLPLGRKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKV 470
WYESHY LPLGRK GAKLT E I+NKKRS K + Y R++ AK+
Sbjct: 112 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 158
Score = 97.9 bits (233), Expect = 2e-20
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +PY ++ G P P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 76 TRIIDVVYNAS 86
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 157 bits (382), Expect = 1e-38
Identities = 89/167 (53%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSA-YPLRSFTWWKY*VPCAASG 179
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP + +R V
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVR--------VRGGNKK 54
Query: 180 HR*LLLGIGMFNSQNPYH*CCV*----------CINNELVRTKTLVKNAIVVVDATPFRQ 329
+R L L +G F+ + CC NNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 55 YRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 111
Query: 330 WYESHYTLPLGRKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKV 470
WYESHY LPLGRK GAKLT E I+NKKRS K + Y R++ AK+
Sbjct: 112 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 158
Score = 97.9 bits (233), Expect = 2e-20
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +PY ++ G P P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 76 TRIIDVVYNAS 86
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 157 bits (382), Expect = 1e-38
Identities = 89/167 (53%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSA-YPLRSFTWWKY*VPCAASG 179
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP + +R V
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVR--------VRGGNKK 54
Query: 180 HR*LLLGIGMFNSQNPYH*CCV*----------CINNELVRTKTLVKNAIVVVDATPFRQ 329
+R L L +G F+ + CC NNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 55 YRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 111
Query: 330 WYESHYTLPLGRKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKV 470
WYESHY LPLGRK GAKLT E I+NKKRS K + Y R++ AK+
Sbjct: 112 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 158
Score = 97.9 bits (233), Expect = 2e-20
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +PY ++ G P P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 76 TRIIDVVYNAS 86
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 157 bits (382), Expect = 1e-38
Identities = 89/167 (53%), Positives = 107/167 (64%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSA-YPLRSFTWWKY*VPCAASG 179
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP + +R V
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVR--------VRGGNKK 54
Query: 180 HR*LLLGIGMFNSQNPYH*CCV*----------CINNELVRTKTLVKNAIVVVDATPFRQ 329
+R L L +G F+ + CC NNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 55 YRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 111
Query: 330 WYESHYTLPLGRKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKV 470
WYESHY LPLGRK GAKLT E I+NKKRS K + Y R++ AK+
Sbjct: 112 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 158
Score = 97.9 bits (233), Expect = 2e-20
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +PY ++ G P P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 76 TRIIDVVYNAS 86
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 151 bits (367), Expect = 9e-37
Identities = 85/156 (54%), Positives = 101/156 (64%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSAYPLRSFTWWKY*VPCAASGH 182
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++G P R T V
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIG----PRRIHT-----VRVRGGCT 53
Query: 183 R*LLLGIGMFNSQNPYH*CCV*CINNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 362
R + ++N+ N NELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 54 RKTRIIDVVYNASN-----------NELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 102
Query: 363 RKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKV 470
RK GAKLT E I+NKKRS K + Y R++ AK+
Sbjct: 103 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKI 138
Score = 37.5 bits (83), Expect = 0.024
Identities = 29/71 (40%), Positives = 34/71 (47%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +PY ++ G P P+RIH+VR RGG C TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRK 55
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 56 TRIIDVVYNAS 66
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 381 LTEAXEAIINKKRSXKTARXYLARQRLAKV 470
LT E I+NKKRS K + Y R++ AK+
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKI 30
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 291 NAIVVVDATPFRQWYESHYTLPLGRKXGAKLT 386
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 227 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 129
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
>AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to
pre-pro-megakarycyte potentiating factor precursor
protein.
Length = 1053
Score = 29.1 bits (62), Expect = 8.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 69 SSCVWAHVSHRWPFAYAS 16
+SC WA HRWP + S
Sbjct: 221 TSCAWAQAVHRWPVLWGS 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,364,561
Number of Sequences: 237096
Number of extensions: 1518492
Number of successful extensions: 3676
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3676
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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