Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30768
(480 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 177 7e-47
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 0.97
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 0.97
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 2.2
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 3.0
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 3.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 3.9
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 3.9
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 3.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 5.2
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 5.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 5.2
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 5.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.9
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.9
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.9
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.1
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 177 bits (430), Expect = 7e-47
Identities = 97/161 (60%), Positives = 108/161 (67%), Gaps = 2/161 (1%)
Frame = +3
Query: 3 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPSA-YPLRSFTW-WKY*VPCAAS 176
ISRDHWHKRRATGGKR PIRKKRK+ELGRPAANT+LGP + +R+ KY +
Sbjct: 3 ISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDT 62
Query: 177 GHR*LLLGIGMFNSQNPYH*CCV*CINNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 356
G+ G + NNELVRTKTLVKNAIV +DATPFRQWYE HY LP
Sbjct: 63 GN--FSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLP 120
Query: 357 LGRKXGAKLTEAXEAIINKKRSXKTARXYLARQRLAKVXGA 479
LGRK GAKLTEA E ++NKKRS K Y ARQR AKV A
Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPA 161
Score = 101 bits (241), Expect = 5e-24
Identities = 47/71 (66%), Positives = 53/71 (74%)
Frame = +1
Query: 43 GNVRPYARRGSMS*GVPLQTPGSVPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 222
G +P ++ G P PQRIH+VR+RGGN KYRALRLDTGNFSWGSEC+TRK
Sbjct: 16 GKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSWGSECTTRK 75
Query: 223 TRIIDVVYNAS 255
TRIIDVVYNAS
Sbjct: 76 TRIIDVVYNAS 86
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 0.97
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 305 YNNCILDKGLCT 270
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 0.97
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 305 YNNCILDKGLCT 270
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 22.6 bits (46), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 94 LQTPGSVPQRIHSVRSRGGNTKY 162
LQ PG VP+ I S RG + Y
Sbjct: 38 LQYPGCVPKPIPSYACRGRCSSY 60
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 305 YNNCILDKGLCTHQ 264
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 305 YNNCILDKGLCTHQ 264
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 338 LIPLPEWSCIYYNNC 294
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 305 YNNCILDKGLCT 270
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 305 YNNCILDKGLCT 270
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 305 YNNCILDKGLCT 270
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 20.6 bits (41), Expect = 9.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 151 FHHVNERSGYAEGPSLVFAAGRPNSYF 71
FH E+ ++GPS V YF
Sbjct: 287 FHFEGEKGPNSQGPSSVIDTNTGVDYF 313
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 9.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 89 SRCKHQARSLSVSTPFVHVVEILSTV 166
S C R L STP H V +L V
Sbjct: 51 SACSPYFRELLKSTPCKHPVIVLQDV 76
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,583
Number of Sequences: 438
Number of extensions: 2655
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -