Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30761
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0290 + 2246791-2247027,2248089-2248346 55 2e-08
10_08_0310 - 16669565-16669822,16670558-16670794 54 2e-08
05_07_0305 - 29097478-29097598,29097766-29097866,29098136-290982... 34 0.031
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 2.0
01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707 24 2.6
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 27 2.7
09_02_0549 + 10485415-10486107 27 3.6
06_01_1185 + 10183666-10184469 27 3.6
10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007 27 4.7
09_01_0142 - 2103224-2103864,2104264-2104399 27 4.7
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484 27 4.7
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 26 6.2
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 26 6.2
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 26 6.2
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 26 6.2
10_04_0004 + 7389321-7390013 26 8.3
05_03_0261 + 11214086-11214148,11215019-11215462,11216504-112166... 26 8.3
04_03_0151 + 11905926-11906618 26 8.3
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 26 8.3
01_06_1794 - 39919363-39920025 26 8.3
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999 26 8.3
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQKTSLRESK 138
NVT A+GV +NK+V RII KRI++RVEHV+ S+C ++ LR+ K
Sbjct: 66 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIK 111
Score = 32.7 bits (71), Expect = 0.072
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 123 LKRVKENERLLKEAKAAGKTVNLKRQPAPXKAAHIVSG 236
L+++K N++L +AKA G+ ++ KRQP K +V G
Sbjct: 107 LRKIK-NDQLKADAKARGEVISTKRQPEGPKPGFMVEG 143
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 54.4 bits (125), Expect = 2e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQKTSLRESK 138
NVT A+GV +NK+V RII KRI++RVEHV+ S+C ++ LR+ K
Sbjct: 66 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIK 111
Score = 35.1 bits (77), Expect = 0.013
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 111 TKDFLKRVKENERLLKEAKAAGKTVNLKRQPAPXKAAHIVSG 236
T++F R +N++L +AKA G+ ++ KRQP K +V G
Sbjct: 102 TEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPKPGFMVEG 143
>05_07_0305 -
29097478-29097598,29097766-29097866,29098136-29098288,
29098404-29098542,29098649-29098719,29099022-29099333,
29099605-29099903,29100011-29100271,29100365-29100471,
29100588-29100739,29100816-29100970,29102946-29103141,
29103340-29103468,29103540-29103641,29103736-29103889,
29103970-29104058
Length = 846
Score = 33.9 bits (74), Expect = 0.031
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = +1
Query: 91 VKHSKCRQKTSLRESKRMRGY*RKPRLP------ARP----ST*RDSQLPLKLPTSSVEL 240
++H + ++ T L E+ R +G + P A P ST R+++LPLK+ S+ +
Sbjct: 205 LRHKQTKRTTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTSRENELPLKVDPSNCKH 264
Query: 241 RNPSYCAYPIRIRSVKSN 294
PSYC P +++S+
Sbjct: 265 CTPSYCLLPKNCVTLQSS 282
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 90 CQALQVQTKDFLKRVKENERLLKEAKAA 173
C A +V+ +D ++R KE R +KEA A+
Sbjct: 3 CTASKVEQEDTVRRCKERRRHMKEAVAS 30
>01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707
Length = 293
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 162 AKAAGKTVNLKRQPAPXKAAHIVSGTEKPVLLRLSHTNS 278
A AA ++ Q P H +S + L RLS TNS
Sbjct: 85 AAAAAAGASMMEQLVPEITTHALSYLDYTSLCRLSMTNS 123
Score = 22.2 bits (45), Expect(2) = 2.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 CSCSRCDCQQA 41
C C+RC C+ A
Sbjct: 51 CGCARCGCRAA 61
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 9 CSCSRCDCQQACSRKDYTEAHQYPC 83
C C C C + RKD A +Y C
Sbjct: 394 CGCMMCKCIYSDQRKDIVLADKYTC 418
>09_02_0549 + 10485415-10486107
Length = 230
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKRMRGY*RK-PR- 168
NV +IV V+GRI+P I ++H + +C++ S + +R R+ PR
Sbjct: 101 NVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGSTLLRQHPRQ 160
Query: 169 ---LPARPST*RDSQLPLKLP 222
P RP+ S P P
Sbjct: 161 VLSAPGRPTVVSSSNAPRIAP 181
>06_01_1185 + 10183666-10184469
Length = 267
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKR 141
NV +IV VRGRI+P I ++H + +C++ S + +R
Sbjct: 101 NVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCKENNSSLQLQR 149
>10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007
Length = 272
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKR 141
NV +IV VRGRI+P I ++H + +C++ S + +R
Sbjct: 143 NVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQR 191
>09_01_0142 - 2103224-2103864,2104264-2104399
Length = 258
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKR 141
NV +IV VRGRI+P I ++H + +C++ S + +R
Sbjct: 129 NVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQR 177
>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
Length = 543
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKR 141
NV +IV VRGRI+P I ++H + +C++ S + +R
Sbjct: 414 NVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQR 462
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 124 LRESKRMRGY*RKPRLPARPST*RDSQLPLKLPTSSVELRNP 249
LR G R+PRL RP R S P+ LP+ L P
Sbjct: 239 LRRELVTGGRVRRPRLSRRPRPPRRSSSPVPLPSPHRILHRP 280
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 80 VLSMSSTPSADKRLP*ESQRE*EATEGSQGCRQDRQP 190
+L M + P D+ P + ++ +GSQ Q RQP
Sbjct: 597 MLQMKNIPHCDECFPNKEEQWIRFLQGSQASEQQRQP 633
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 114 KDFLKRVKENERLLKEAKAAGKTVNLKRQPAPXKAAHIVSGT 239
KD E ERL KE +A G+T+ K + + I GT
Sbjct: 124 KDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGT 165
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 SCSRCD-CQQACSRKDYTEAHQYPC*ACQALQVQTKDFLKRVKENERLLKEAKAAGKTVN 188
SC +C C+ S +Y+ P C+ Q F + N+ AK A + +
Sbjct: 32 SCFKCQHCKSTLSLGNYSSIEGVPY--CKPHFEQL--FKETGSYNKSFQSPAKPASEKLT 87
Query: 189 LKRQPAPXKAAHIVSGTEK 245
+ +P KAA + SGT++
Sbjct: 88 PELTRSPSKAARMFSGTQE 106
>10_04_0004 + 7389321-7390013
Length = 230
Score = 25.8 bits (54), Expect = 8.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTSLRESKR----MRGY*RK 162
NV +IV V+GRI+P I ++H + +C++ S + +R +R + R+
Sbjct: 101 NVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGGTLLRQHPRQ 160
Query: 163 P-RLPARPST*RDSQLPLKLP 222
P R + R S P P
Sbjct: 161 VLSAPGRATVVRSSNAPRIAP 181
>05_03_0261 +
11214086-11214148,11215019-11215462,11216504-11216666,
11218145-11218441,11218842-11218858
Length = 327
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 28 IVNKRVRGRIIPKRINIRVEHVKHSKCRQKTSLRESKRMRG 150
+VN+ + I R I E VKHS+ ++ ++ES+ M+G
Sbjct: 169 MVNEEIEENIQKTR-EIESEIVKHSETEKEYIMKESELMKG 208
>04_03_0151 + 11905926-11906618
Length = 230
Score = 25.8 bits (54), Expect = 8.3
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Frame = +1
Query: 1 NVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQKTS----LRESKRMRGY*RK 162
NV +IV V+GRI+P I ++H + +C++ S R S +R + R+
Sbjct: 101 NVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGSTLLRQHPRQ 160
Query: 163 -PRLPARPST*RDSQ----LPLKLPTSSVELRNPS 252
P P+ S P++ P L NP+
Sbjct: 161 ASSAPGHPAVVSSSNAPRIAPIQRPIGKSPLGNPA 195
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 56 LYRSASISVLSMSSTPSADKR 118
+Y+SA++ V + SS P+ADK+
Sbjct: 410 VYKSANLQVSNSSSIPAADKQ 430
>01_06_1794 - 39919363-39920025
Length = 220
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 129 RVKENERLLKEAKAAGKTVNLKRQPAPXKAAHIVSG 236
R ++ ++ EA AAG + KRQP P SG
Sbjct: 27 RQQQQQQQQYEAAAAGDKTSAKRQPPPPSRLKKTSG 62
>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
Length = 764
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 9 CSCSRCDCQQACSRKDYTEAHQY 77
CSCS+ D +CS D A Y
Sbjct: 279 CSCSKDDTDSSCSLADEHHARHY 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,703,204
Number of Sequences: 37544
Number of extensions: 126709
Number of successful extensions: 379
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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