Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30759
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 79 5e-15
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 79 5e-15
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 79 5e-15
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 77 2e-14
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 77 2e-14
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 1.9
BC065575-1|AAH65575.1| 395|Homo sapiens TRIM6 protein protein. 30 3.3
BC047564-1|AAH47564.1| 516|Homo sapiens tripartite motif-contai... 30 3.3
AK027664-1|BAB55276.1| 488|Homo sapiens protein ( Homo sapiens ... 30 3.3
AF220030-1|AAG53484.1| 488|Homo sapiens tripartite motif protei... 30 3.3
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 29 4.3
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 4.3
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 4.3
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 4.3
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 4.3
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 29 4.3
BC011822-1|AAH11822.1| 405|Homo sapiens ubiquitin associated do... 28 9.9
BC004967-1|AAH04967.1| 405|Homo sapiens ubiquitin associated do... 28 9.9
AL355574-3|CAI14118.1| 405|Homo sapiens UBA domain containing 1... 28 9.9
AF176796-1|AAD51084.1| 404|Homo sapiens putative glialblastoma ... 28 9.9
AF068195-1|AAC21559.1| 334|Homo sapiens putative glialblastoma ... 28 9.9
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 273 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 331
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 332 KTMRRNTILRQARNHKLRV 350
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 79.0 bits (186), Expect = 5e-15
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/79 (49%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 274 KSNYNLPMHEMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 332
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 333 KTMRRNTILRQARNHKLRV 351
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 77.4 bits (182), Expect = 2e-14
Identities = 40/79 (50%), Positives = 50/79 (63%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYA 199
K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA
Sbjct: 288 KSNYNLPMHKMINTDLSRILKSPEIQRALRAP-RKKIHRRVLKKNPLKNLRIMLKLNPYA 346
Query: 200 AVLXXXAILELRRRKNXKV 256
+ IL R +V
Sbjct: 347 KTMRRNTILCQARNHKLRV 365
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 8 PSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRV 130
P ++K + L + ++AN + RL+KSD+++ +P N V
Sbjct: 35 PEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDV 75
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 8 PSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRV 130
P ++K + L + ++AN + RL+KSD+++ +P N V
Sbjct: 780 PEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDV 820
>BC065575-1|AAH65575.1| 395|Homo sapiens TRIM6 protein protein.
Length = 395
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 89 EIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 208
++R + RAP KR++R R+L + + + LNP+ A L
Sbjct: 180 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANL 219
>BC047564-1|AAH47564.1| 516|Homo sapiens tripartite
motif-containing 6 protein.
Length = 516
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 89 EIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 208
++R + RAP KR++R R+L + + + LNP+ A L
Sbjct: 301 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANL 340
>AK027664-1|BAB55276.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ14758 fis, clone NT2RP3003251, weakly similar to
52 KD RO PROTEIN. ).
Length = 488
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 89 EIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 208
++R + RAP KR++R R+L + + + LNP+ A L
Sbjct: 273 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANL 312
>AF220030-1|AAG53484.1| 488|Homo sapiens tripartite motif protein
TRIM6 protein.
Length = 488
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 89 EIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 208
++R + RAP KR++R R+L + + + LNP+ A L
Sbjct: 273 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANL 312
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 145 ACSTDHAFVGGSTEDLPDLIRLEKTCEVSVGHL 47
ACS + ++GG TE LP + T +VG L
Sbjct: 2795 ACSGGNGYLGGCTESLPTYVTTHPTVPQNVGPL 2827
>BC011822-1|AAH11822.1| 405|Homo sapiens ubiquitin associated
domain containing 1 protein.
Length = 405
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLN 190
KK P PKMA+ K D+ +AP + ++RAT L ++A ++ N
Sbjct: 93 KKRAPSPLPKMADVSAEEKKKQDQ-----KAPDKEAILRATANLPSYNMDRAAVQTN 144
>BC004967-1|AAH04967.1| 405|Homo sapiens ubiquitin associated
domain containing 1 protein.
Length = 405
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLN 190
KK P PKMA+ K D+ +AP + ++RAT L ++A ++ N
Sbjct: 93 KKRAPSPLPKMADVSAEEKKKQDQ-----KAPDKEAILRATANLPSYNMDRAAVQTN 144
>AL355574-3|CAI14118.1| 405|Homo sapiens UBA domain containing 1
protein.
Length = 405
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLN 190
KK P PKMA+ K D+ +AP + ++RAT L ++A ++ N
Sbjct: 93 KKRAPSPLPKMADVSAEEKKKQDQ-----KAPDKEAILRATANLPSYNMDRAAVQTN 144
>AF176796-1|AAD51084.1| 404|Homo sapiens putative glialblastoma
cell differentiation-related protein protein.
Length = 404
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLN 190
KK P PKMA+ K D+ +AP + ++RAT L ++A ++ N
Sbjct: 93 KKRAPSPLPKMADVSAEEKKKQDQ-----KAPDKEAILRATANLPSYNMDRAAVQTN 144
>AF068195-1|AAC21559.1| 334|Homo sapiens putative glialblastoma
cell differentiation-related protein protein.
Length = 334
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 20 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPXNKRVIRATRKLNPLTNNKAMLKLN 190
KK P PKMA+ K D+ +AP + ++RAT L ++A ++ N
Sbjct: 22 KKRAPSPLPKMADVSAEEKKKQDQ-----KAPDKEAILRATANLPSYNMDRAAVQTN 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,110,053
Number of Sequences: 237096
Number of extensions: 771740
Number of successful extensions: 1360
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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