Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30759
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   0.74 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 35  LPQPKMANTDLTRLLKSDEIRKVLRAP 115
           LP P   N  L  L+ S E+R+  +AP
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAP 516


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 139  YTQIEPAH*QQGDAETQS 192
            YT  +PA+ QQG A+ Q+
Sbjct: 997  YTPPQPANAQQGQAQAQA 1014


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 98  KVLRAPXNKRVIRATRKLNPL 160
           K++R+P   R I   R  NPL
Sbjct: 894 KLIRSPDTLRKIAQNRGTNPL 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,943
Number of Sequences: 438
Number of extensions: 1085
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)